Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS311A08f
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061508-1|AAL29056.1|  299|Drosophila melanogaster LD46344p pro...   173   1e-43
AE013599-2777|AAM68447.1|  243|Drosophila melanogaster CG15081-P...   173   1e-43
AE013599-2776|AAF57631.2|  243|Drosophila melanogaster CG15081-P...   173   1e-43
AE013599-2775|AAF57632.2|  243|Drosophila melanogaster CG15081-P...   173   1e-43
AY122111-1|AAM52623.1|  276|Drosophila melanogaster GH12454p pro...   114   6e-26
AE014134-3047|AAF53765.1|  276|Drosophila melanogaster CG10691-P...   114   6e-26
AE014134-3046|AAN11026.1|  276|Drosophila melanogaster CG10691-P...   114   6e-26
X04228-3|CAA27810.1|  203|Drosophila melanogaster protein ( Dros...    58   4e-09
X04227-3|CAA27807.1|  203|Drosophila melanogaster URF 3 protein.       58   4e-09

>AY061508-1|AAL29056.1|  299|Drosophila melanogaster LD46344p
           protein.
          Length = 299

 Score =  173 bits (420), Expect = 1e-43
 Identities = 80/131 (61%), Positives = 97/131 (74%)
 Frame = +3

Query: 54  MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 233
           MAQSK+ND+AGK                          SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 234 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 413
           Q  +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+  L  
Sbjct: 61  QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120

Query: 414 MYRQLGTDYDE 446
           +++QLG DYDE
Sbjct: 121 LHKQLGVDYDE 131


>AE013599-2777|AAM68447.1|  243|Drosophila melanogaster CG15081-PC,
           isoform C protein.
          Length = 243

 Score =  173 bits (420), Expect = 1e-43
 Identities = 80/131 (61%), Positives = 97/131 (74%)
 Frame = +3

Query: 54  MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 233
           MAQSK+ND+AGK                          SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 234 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 413
           Q  +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+  L  
Sbjct: 61  QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120

Query: 414 MYRQLGTDYDE 446
           +++QLG DYDE
Sbjct: 121 LHKQLGVDYDE 131


>AE013599-2776|AAF57631.2|  243|Drosophila melanogaster CG15081-PB,
           isoform B protein.
          Length = 243

 Score =  173 bits (420), Expect = 1e-43
 Identities = 80/131 (61%), Positives = 97/131 (74%)
 Frame = +3

Query: 54  MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 233
           MAQSK+ND+AGK                          SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 234 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 413
           Q  +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+  L  
Sbjct: 61  QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120

Query: 414 MYRQLGTDYDE 446
           +++QLG DYDE
Sbjct: 121 LHKQLGVDYDE 131


>AE013599-2775|AAF57632.2|  243|Drosophila melanogaster CG15081-PA,
           isoform A protein.
          Length = 243

 Score =  173 bits (420), Expect = 1e-43
 Identities = 80/131 (61%), Positives = 97/131 (74%)
 Frame = +3

Query: 54  MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXSQSVFTVEGGHRAIMFNRIGGV 233
           MAQSK+ND+AGK                          SQS++TVEGGHRAI+F+R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 234 QQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLAT 413
           Q  +++EG+H RIPWFQYPIIYDIRSRPRKISSPTGSKDLQM+NISLRVLSRPD+  L  
Sbjct: 61  QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPY 120

Query: 414 MYRQLGTDYDE 446
           +++QLG DYDE
Sbjct: 121 LHKQLGVDYDE 131


>AY122111-1|AAM52623.1|  276|Drosophila melanogaster GH12454p
           protein.
          Length = 276

 Score =  114 bits (274), Expect = 6e-26
 Identities = 51/93 (54%), Positives = 69/93 (74%)
 Frame = +3

Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
           + +++ VEGGHRA++F+R  G++++V  EG HF IPW Q PII+DIRS+PR +   TGSK
Sbjct: 24  NSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSK 83

Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
           DLQ VNI+LR+L RP  + L  +Y  LG DYDE
Sbjct: 84  DLQNVNITLRILYRPIPDQLPKIYTILGQDYDE 116


>AE014134-3047|AAF53765.1|  276|Drosophila melanogaster CG10691-PB,
           isoform B protein.
          Length = 276

 Score =  114 bits (274), Expect = 6e-26
 Identities = 51/93 (54%), Positives = 69/93 (74%)
 Frame = +3

Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
           + +++ VEGGHRA++F+R  G++++V  EG HF IPW Q PII+DIRS+PR +   TGSK
Sbjct: 24  NSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSK 83

Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
           DLQ VNI+LR+L RP  + L  +Y  LG DYDE
Sbjct: 84  DLQNVNITLRILYRPIPDQLPKIYTILGQDYDE 116


>AE014134-3046|AAN11026.1|  276|Drosophila melanogaster CG10691-PA,
           isoform A protein.
          Length = 276

 Score =  114 bits (274), Expect = 6e-26
 Identities = 51/93 (54%), Positives = 69/93 (74%)
 Frame = +3

Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
           + +++ VEGGHRA++F+R  G++++V  EG HF IPW Q PII+DIRS+PR +   TGSK
Sbjct: 24  NSALYNVEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRPIIFDIRSQPRNVPVITGSK 83

Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
           DLQ VNI+LR+L RP  + L  +Y  LG DYDE
Sbjct: 84  DLQNVNITLRILYRPIPDQLPKIYTILGQDYDE 116


>X04228-3|CAA27810.1|  203|Drosophila melanogaster protein (
           Drosophila mRNA forCc gene from dopa decarboxylase gene
           cluster;  mapping2.0 kb from the 5'end of Ddc gene.  ).
          Length = 203

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +3

Query: 303 IRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
           IRS+PR +   TGSKDLQ VNI+LR+L RP  + L  +Y  LG DYDE
Sbjct: 11  IRSQPRNVPEITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDE 58


>X04227-3|CAA27807.1|  203|Drosophila melanogaster URF 3 protein.
          Length = 203

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +3

Query: 303 IRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
           IRS+PR +   TGSKDLQ VNI+LR+L RP  + L  +Y  LG DYDE
Sbjct: 11  IRSQPRNVPEITGSKDLQNVNITLRILYRPIPDQLPKIYTILGQDYDE 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,011,833
Number of Sequences: 53049
Number of extensions: 399677
Number of successful extensions: 1010
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)