Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311A08f
(449 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P241... 121 2e-28
At1g03860.3 68414.m00370 prohibitin, putative similar to SP|P241... 121 2e-28
At1g03860.1 68414.m00369 prohibitin, putative similar to SP|P241... 121 2e-28
At2g20530.1 68415.m02398 prohibitin, putative similar to SP|P241... 116 1e-26
At5g44140.1 68418.m05402 prohibitin, putative similar to SP|P241... 108 1e-24
At3g27280.2 68416.m03410 prohibitin, putative strong similarity ... 106 8e-24
At3g27280.1 68416.m03409 prohibitin, putative strong similarity ... 106 8e-24
At5g40770.1 68418.m04948 prohibitin identical to prohibitin [Ara... 105 1e-23
At5g14300.1 68418.m01672 prohibitin, putative similar to prohibi... 95 2e-20
At1g03860.2 68414.m00368 prohibitin, putative similar to SP|P241... 78 3e-15
At1g14270.2 68414.m01691 CAAX amino terminal protease family pro... 28 3.4
At1g14270.1 68414.m01692 CAAX amino terminal protease family pro... 28 3.4
>At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 288
Score = 121 bits (292), Expect = 2e-28
Identities = 52/93 (55%), Positives = 70/93 (75%)
Frame = +3
Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
+ S++ VEGGHRAIMFNR+ G++ V+ EG H IPWF+ P+IYD+R+RP + S +GS+
Sbjct: 33 THSLYNVEGGHRAIMFNRLVGIKDKVYPEGTHLMIPWFERPVIYDVRARPYLVESTSGSR 92
Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
DLQMV I LRVL+RP A+ L +YR LG +Y E
Sbjct: 93 DLQMVKIGLRVLTRPMADQLPEIYRSLGENYSE 125
>At1g03860.3 68414.m00370 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 121 bits (292), Expect = 2e-28
Identities = 51/93 (54%), Positives = 70/93 (75%)
Frame = +3
Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
+ S++ V+GGHRA+MFNR+ G+++ V+ EG HF +PWF+ PIIYD+R+RP + S TGS
Sbjct: 33 TNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERPIIYDVRARPYLVESTTGSH 92
Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
DLQMV I LRVL+RP + L +YR LG +Y E
Sbjct: 93 DLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSE 125
>At1g03860.1 68414.m00369 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 121 bits (292), Expect = 2e-28
Identities = 51/93 (54%), Positives = 70/93 (75%)
Frame = +3
Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
+ S++ V+GGHRA+MFNR+ G+++ V+ EG HF +PWF+ PIIYD+R+RP + S TGS
Sbjct: 33 TNSLYNVDGGHRAVMFNRLTGIKEKVYPEGTHFMVPWFERPIIYDVRARPYLVESTTGSH 92
Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
DLQMV I LRVL+RP + L +YR LG +Y E
Sbjct: 93 DLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSE 125
>At2g20530.1 68415.m02398 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 116 bits (278), Expect = 1e-26
Identities = 49/93 (52%), Positives = 70/93 (75%)
Frame = +3
Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
+ +++ V+GGHRAI+FNR+ G++ V+ EG H IPWF+ PIIYD+R++P + S +GS+
Sbjct: 31 THTLYNVDGGHRAIVFNRLVGIKDKVYPEGTHLMIPWFERPIIYDVRAKPYLVESTSGSR 90
Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
DLQMV I LRVL+RP A+ L +YR LG +Y E
Sbjct: 91 DLQMVKIGLRVLTRPMADQLPEVYRSLGENYRE 123
>At5g44140.1 68418.m05402 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family; non-consensus TT acceptor
splice site at exon 2
Length = 278
Score = 108 bits (260), Expect = 1e-24
Identities = 50/91 (54%), Positives = 65/91 (71%)
Frame = +3
Query: 174 SVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDL 353
S++ V+GGHRAI+FNR G++ V+ EG HF+IP F+ IIYD+RSRP +S TGS DL
Sbjct: 35 SMYNVDGGHRAIVFNRFTGIKDRVYPEGTHFKIPLFERAIIYDVRSRPYVENSQTGSNDL 94
Query: 354 QMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
Q V I LRVL+RP + L +YR LG +Y E
Sbjct: 95 QTVTIGLRVLTRPMGDRLPEIYRTLGQNYGE 125
>At3g27280.2 68416.m03410 prohibitin, putative strong similarity to
prohibitin [Arabidopsis thaliana] GI:1946331; contains
Pfam profile PF01145: SPFH domain / Band 7 family
Length = 279
Score = 106 bits (254), Expect = 8e-24
Identities = 47/93 (50%), Positives = 67/93 (72%)
Frame = +3
Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
+ S++TV+GG RA++F+R GV EG HF IP+ Q P IYDIR++P SS +G+K
Sbjct: 29 NSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTK 88
Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
DLQMVN++LRVL RP+ + L +++ LG +YDE
Sbjct: 89 DLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDE 121
>At3g27280.1 68416.m03409 prohibitin, putative strong similarity to
prohibitin [Arabidopsis thaliana] GI:1946331; contains
Pfam profile PF01145: SPFH domain / Band 7 family
Length = 279
Score = 106 bits (254), Expect = 8e-24
Identities = 47/93 (50%), Positives = 67/93 (72%)
Frame = +3
Query: 168 SQSVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSK 347
+ S++TV+GG RA++F+R GV EG HF IP+ Q P IYDIR++P SS +G+K
Sbjct: 29 NSSLYTVDGGERAVLFDRFRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTK 88
Query: 348 DLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
DLQMVN++LRVL RP+ + L +++ LG +YDE
Sbjct: 89 DLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDE 121
>At5g40770.1 68418.m04948 prohibitin identical to prohibitin
[Arabidopsis thaliana] GI:1946331
Length = 277
Score = 105 bits (252), Expect = 1e-23
Identities = 48/91 (52%), Positives = 66/91 (72%)
Frame = +3
Query: 174 SVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDL 353
S+FTV+GG RA++F+R GV EG HF IP Q P I+DIR++P SS +G+KDL
Sbjct: 31 SLFTVDGGERAVIFDRFRGVMDQTVGEGTHFLIPILQRPHIFDIRTKPHTFSSISGTKDL 90
Query: 354 QMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
QMVN++LRVLSRP+ + L +++ LG +YDE
Sbjct: 91 QMVNLTLRVLSRPEVSRLPYIFQTLGLEYDE 121
>At5g14300.1 68418.m01672 prohibitin, putative similar to prohibitin
[Arabidopsis thaliana] GI:1946331; contains Pfam profile
PF01145: SPFH domain / Band 7 family
Length = 249
Score = 95.1 bits (226), Expect = 2e-20
Identities = 40/74 (54%), Positives = 58/74 (78%)
Frame = +3
Query: 174 SVFTVEGGHRAIMFNRIGGVQQHVFTEGMHFRIPWFQYPIIYDIRSRPRKISSPTGSKDL 353
++FTV+GG RA+MF+R G+ + EG H +IPW Q P I+DIR++P KI++ +G+KDL
Sbjct: 23 TMFTVDGGQRAVMFHRFEGILEEPVGEGTHRKIPWVQKPYIFDIRTKPYKINTDSGTKDL 82
Query: 354 QMVNISLRVLSRPD 395
QMVN++LRV+ RPD
Sbjct: 83 QMVNLTLRVMFRPD 96
>At1g03860.2 68414.m00368 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 221
Score = 77.8 bits (183), Expect = 3e-15
Identities = 34/59 (57%), Positives = 43/59 (72%)
Frame = +3
Query: 270 IPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLSRPDANMLATMYRQLGTDYDE 446
+PWF+ PIIYD+R+RP + S TGS DLQMV I LRVL+RP + L +YR LG +Y E
Sbjct: 2 VPWFERPIIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSE 60
>At1g14270.2 68414.m01691 CAAX amino terminal protease family
protein contains Pfam profile PF02517: CAAX amino
terminal protease family
Length = 247
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -2
Query: 367 MFTICKSFEPVGEDILR 317
+FT+ K+F+P+ EDILR
Sbjct: 58 IFTVAKTFDPLPEDILR 74
>At1g14270.1 68414.m01692 CAAX amino terminal protease family
protein contains Pfam profile PF02517: CAAX amino
terminal protease family
Length = 353
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -2
Query: 367 MFTICKSFEPVGEDILR 317
+FT+ K+F+P+ EDILR
Sbjct: 164 IFTVAKTFDPLPEDILR 180
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,810,343
Number of Sequences: 28952
Number of extensions: 196310
Number of successful extensions: 411
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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