Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS311A04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 143 4e-34
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 143 4e-34
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 143 4e-34
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 141 2e-33
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 138 8e-33
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 136 4e-32
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 136 4e-32
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 66 7e-11
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 56 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 115
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 116 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 175
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 176 RKQAEKNVEKKIDKYTEVLKTHG 198
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 143 bits (346), Expect = 4e-34
Identities = 64/143 (44%), Positives = 90/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 141 bits (341), Expect = 2e-33
Identities = 63/143 (44%), Positives = 89/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 58 LRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 138 bits (335), Expect = 8e-33
Identities = 62/143 (43%), Positives = 89/143 (62%)
Frame = -2
Query: 493 LRKRCXVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXX 314
LRKR +P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 58 LRKRMNTSPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKR 117
Query: 313 XXXXXXXXVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRI 134
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+
Sbjct: 118 MVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRL 177
Query: 133 TKDAGEKVSKATTPFTTIIQSYG 65
K A + V K +T +++++G
Sbjct: 178 RKQAEKNVEKKIDKYTEVLKTHG 200
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 136 bits (329), Expect = 4e-32
Identities = 60/136 (44%), Positives = 86/136 (63%)
Frame = -2
Query: 472 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 293
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 4 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 63
Query: 292 XVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRITKDAGEK 113
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+ K A +
Sbjct: 64 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAEKN 123
Query: 112 VSKATTPFTTIIQSYG 65
V K +T +++++G
Sbjct: 124 VEKKIDKYTEVLKTHG 139
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 136 bits (329), Expect = 4e-32
Identities = 60/136 (44%), Positives = 86/136 (63%)
Frame = -2
Query: 472 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 293
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 4 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 63
Query: 292 XVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXXXXXXXXXXAYEKKLKRITKDAGEK 113
V LKP R + ++GRL+HE+GWKY+ V LE +K+L R+ K A +
Sbjct: 64 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 123
Query: 112 VSKATTPFTTIIQSYG 65
V K +T +++++G
Sbjct: 124 VEKKIDKYTEVLKTHG 139
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 66.1 bits (154), Expect = 7e-11
Identities = 35/101 (34%), Positives = 50/101 (49%)
Frame = -2
Query: 406 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXVFCLKPGRNYCHVGRLSHEIG 227
M+ HKT+RG +L L+ +DG PPP+D V LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 226 WKYRDVVRKLEXXXXXXXXXXXAYEKKLKRITKDAGEKVSK 104
WKY+ V LE +K+L R+ K A + V K
Sbjct: 61 WKYQAVTATLEEKRKEKAKIHYWKKKQLMRLRKQAEKNVKK 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,442,764
Number of Sequences: 237096
Number of extensions: 1621286
Number of successful extensions: 17470
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17454
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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