Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310H10f
         (475 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.4  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.7  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 175 VYQCLLANDQDKS 213
           +YQC + NDQ+ +
Sbjct: 387 MYQCFIRNDQESA 399


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 11  FYYTQTFIEENYINV 55
           F Y+QT+I+  Y+ +
Sbjct: 183 FEYSQTYIQHGYLEL 197


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 11  FYYTQTFIEENYINV 55
           F Y+QT+I+  Y+ +
Sbjct: 183 FEYSQTYIQHGYLEL 197


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 11  FYYTQTFIEENYINV 55
           F Y+QT+I+  Y+ +
Sbjct: 183 FEYSQTYIQHGYLEL 197


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
 Frame = +3

Query: 141 RVHTPRP--PKLKSLPMPSCQ 197
           R H+P P  P+   +  PSCQ
Sbjct: 22  RPHSPEPYPPRCPPIYEPSCQ 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,204
Number of Sequences: 336
Number of extensions: 1868
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)