SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310H10f
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   4.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   7.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   9.5  

>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 105 PKWCIPINNASTRVHTPRPPKLKSLPMPS 191
           P    P    +T+VH  +PP    +P+PS
Sbjct: 12  PTGANPHQTLTTQVHPSQPPVPMLVPIPS 40


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 387 FFSFTSXNTI*LIALYLMMXYVWGRG 310
           FF      T+ +I  YL +   WGRG
Sbjct: 67  FFGINEDATVRIIDPYLDLEENWGRG 92


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 152  SVDPSGCIVNWNTPFRTS*W 93
            ++   G +V WN P   S W
Sbjct: 1476 TIRQQGSLVRWNEPLSVSHW 1495


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,264
Number of Sequences: 2352
Number of extensions: 8111
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -