BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310H10f (475 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 23 4.1 AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 23 7.2 AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 22 9.5 >AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. Length = 165 Score = 23.4 bits (48), Expect = 4.1 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +3 Query: 105 PKWCIPINNASTRVHTPRPPKLKSLPMPS 191 P P +T+VH +PP +P+PS Sbjct: 12 PTGANPHQTLTTQVHPSQPPVPMLVPIPS 40 >AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. Length = 525 Score = 22.6 bits (46), Expect = 7.2 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -2 Query: 387 FFSFTSXNTI*LIALYLMMXYVWGRG 310 FF T+ +I YL + WGRG Sbjct: 67 FFGINEDATVRIIDPYLDLEENWGRG 92 >AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. Length = 2259 Score = 22.2 bits (45), Expect = 9.5 Identities = 7/20 (35%), Positives = 10/20 (50%) Frame = -3 Query: 152 SVDPSGCIVNWNTPFRTS*W 93 ++ G +V WN P S W Sbjct: 1476 TIRQQGSLVRWNEPLSVSHW 1495 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 437,264 Number of Sequences: 2352 Number of extensions: 8111 Number of successful extensions: 21 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21 length of database: 563,979 effective HSP length: 59 effective length of database: 425,211 effective search space used: 41670678 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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