Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310H09f
(309 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 143 8e-34
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 139 1e-32
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 111 3e-24
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 80 8e-15
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 76 1e-13
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 75 3e-13
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 69 2e-11
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 63 1e-09
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 56 2e-07
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 55 3e-07
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 3e-07
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 54 8e-07
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 51 6e-06
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 50 1e-05
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 44 5e-04
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 9e-04
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 42 0.004
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 40 0.011
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 40 0.014
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 39 0.025
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 39 0.025
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 38 0.033
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 37 0.10
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 36 0.13
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 35 0.41
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 35 0.41
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 35 0.41
UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1; ... 33 0.94
UniRef50_Q0CGY8 Cluster: Putative uncharacterized protein; n=1; ... 33 0.94
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 33 1.2
UniRef50_Q82JI5 Cluster: Putative uncharacterized protein; n=2; ... 32 2.2
UniRef50_Q9VP73 Cluster: CG12976-PA; n=2; Sophophora|Rep: CG1297... 32 2.2
UniRef50_A6D6W3 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 32 2.9
UniRef50_UPI00015B47E9 Cluster: PREDICTED: hypothetical protein;... 31 3.8
UniRef50_Q7NAE7 Cluster: PutA; n=1; Mycoplasma gallisepticum|Rep... 31 3.8
UniRef50_Q0LCN2 Cluster: Primosomal protein N'; n=1; Herpetosiph... 31 3.8
UniRef50_A7HZV3 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 31 3.8
UniRef50_Q9H7N4 Cluster: Splicing factor, arginine/serine-rich 1... 31 3.8
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 31 3.8
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 31 3.8
UniRef50_Q63YF3 Cluster: Putative uncharacterized protein; n=30;... 31 5.0
UniRef50_A7QLM8 Cluster: Chromosome chr13 scaffold_120, whole ge... 31 5.0
UniRef50_A7NVA4 Cluster: Chromosome chr18 scaffold_1, whole geno... 31 5.0
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_UPI0000584055 Cluster: PREDICTED: similar to Zinc finge... 31 6.6
UniRef50_O88037 Cluster: Putative serine/threonine protein kinas... 31 6.6
UniRef50_A5N3U4 Cluster: Predicted hydrolase; n=1; Clostridium k... 31 6.6
UniRef50_UPI00015B4584 Cluster: PREDICTED: similar to retrotrans... 30 8.8
UniRef50_Q5CVI9 Cluster: Secreted alpha beta hydrolase family pr... 30 8.8
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 30 8.8
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 143 bits (346), Expect = 8e-34
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 224 MRKAIKDHLDNNPALE 271
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 139 bits (337), Expect = 1e-32
Identities = 62/76 (81%), Positives = 72/76 (94%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 224 MRKAIKDHLDNNPALE 271
MRKAI+ HL+NNPALE
Sbjct: 61 MRKAIRGHLENNPALE 76
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 111 bits (267), Expect = 3e-24
Identities = 48/76 (63%), Positives = 61/76 (80%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 224 MRKAIKDHLDNNPALE 271
+RKA++ HL+ NP LE
Sbjct: 61 IRKALRGHLEQNPNLE 76
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 80.2 bits (189), Expect = 8e-15
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 224 MRKAIKDHLDNN 259
M+++++ H +N+
Sbjct: 61 MKRSVRIHSENS 72
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 76.2 bits (179), Expect = 1e-13
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2
Query: 59 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 238
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 239 KDHLD 253
+ H D
Sbjct: 67 RIHAD 71
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 74.9 bits (176), Expect = 3e-13
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 224 MRKAIKDHLDNNPALE 271
+RKAIK+ + P LE
Sbjct: 68 IRKAIKNQAETQPELE 83
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 68.9 bits (161), Expect = 2e-11
Identities = 34/76 (44%), Positives = 45/76 (59%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 224 MRKAIKDHLDNNPALE 271
+R A+K +L P +E
Sbjct: 61 IRTALKKNLQAVPQIE 76
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 62.9 bits (146), Expect = 1e-09
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2
Query: 71 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 250
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 251 DNNPALE 271
D+ P L+
Sbjct: 69 DSKPELD 75
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 55.6 bits (128), Expect = 2e-07
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +2
Query: 71 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 250
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 55.2 bits (127), Expect = 3e-07
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRGSSIVLMGKNT 220
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 221 MMRKAIKDHLDNNP 262
+ +K + + P
Sbjct: 61 LFKKVLATRVQELP 74
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 55.2 bits (127), Expect = 3e-07
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 47 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 220
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 221 MMRKAIKDHLDNNPALE 271
+MR A+++ LD P LE
Sbjct: 72 LMRIALEEKLDERPELE 88
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 53.6 bits (123), Expect = 8e-07
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +2
Query: 56 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 235
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 236 IK 241
++
Sbjct: 67 VQ 68
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 50.8 bits (116), Expect = 6e-06
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 220
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 221 MMRKAIKDHL 250
+++ A++ +
Sbjct: 61 LIKAALQKRI 70
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 50.0 bits (114), Expect = 1e-05
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = +2
Query: 59 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 238
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 239 KDHLDNN 259
+ LD++
Sbjct: 69 -NQLDDD 74
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 44.4 bits (100), Expect = 5e-04
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +2
Query: 17 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 196
RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R S++G +
Sbjct: 16 RSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYA 74
Query: 197 IVLMGKNTMMRKAI 238
+ MGKN +MR A+
Sbjct: 75 RIFMGKNQLMRYAL 88
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 43.6 bits (98), Expect = 9e-04
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 53 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 232
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 233 AIKD 244
A+++
Sbjct: 70 ALEE 73
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 41.5 bits (93), Expect = 0.004
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 224 MRKAIKD 244
+R+AI D
Sbjct: 85 IRRAIAD 91
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 39.9 bits (89), Expect = 0.011
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +2
Query: 89 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 247
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNN 63
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 39.5 bits (88), Expect = 0.014
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +2
Query: 71 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 250
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 251 DNNPA 265
++ A
Sbjct: 68 EDKKA 72
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 38.7 bits (86), Expect = 0.025
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 71 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI-VLMGKNTMMRKAIKDH 247
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 248 LDNNPAL 268
+ P +
Sbjct: 71 KEELPGI 77
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 38.7 bits (86), Expect = 0.025
Identities = 18/59 (30%), Positives = 36/59 (61%)
Frame = +2
Query: 68 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 244
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNE 69
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 38.3 bits (85), Expect = 0.033
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 68 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 235
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 36.7 bits (81), Expect = 0.10
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = -1
Query: 270 SRAGLLSRWSLMALRIIVFFPMSTILEPRSEXXXXXXXCEPTLSAPTMKHFGYSSKSWMI 91
S++G + LMAL +VF P+ T P + E TLS PT YSSK +
Sbjct: 77 SKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLN 136
Query: 90 LTK 82
L K
Sbjct: 137 LAK 139
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 265 PRGGARYPIRPIVSR 309
PRGGARYPIRPIVSR
Sbjct: 259 PRGGARYPIRPIVSR 273
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 34.7 bits (76), Expect = 0.41
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 98 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGS--SIVLMGKNTMMRKAIKDHLD 253
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H D
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQHSD 219
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 34.7 bits (76), Expect = 0.41
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 8 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 187
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 188 GSSIVLMGKNTMMRKAI 238
G+ GK +M KA+
Sbjct: 63 GTGRFFFGKGKVMAKAL 79
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 34.7 bits (76), Expect = 0.41
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 89 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 238
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL 67
>UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 418
Score = 33.5 bits (73), Expect = 0.94
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 5 LKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRIS- 181
+K ++PYA L+ + DKA + + +++LL YP +V D + + I+
Sbjct: 295 IKQAKTPYAALAHQFKTDKAKYDDSSMGLLVKLLGIYPPGTVVQLDTGQFALVISVNINK 354
Query: 182 LRGSSIVLMGKNTMMRKAIKDHLDNNPALE 271
L ++++ + +A+ L+ NP L+
Sbjct: 355 LLAPNVLIYDSSIPKEQAVILDLNENPELK 384
>UniRef50_Q0CGY8 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 1240
Score = 33.5 bits (73), Expect = 0.94
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 119 KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGPGTQ 289
+ +VG + SQQ Q+ + +S+ L G++ M K I ++L+ + L G G +
Sbjct: 823 RTLVVGRRRLSSQQYQEFTTKYKQASLALHGRDVGMAKVIGEYLERDLELLGVTGVE 879
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 17 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 196
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 197 IVLMGKNTMMR 229
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_Q82JI5 Cluster: Putative uncharacterized protein; n=2;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 268
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 157 TDAADPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRGGARYP 288
+DA DP +A WL RA+ + YD ++H P + GG YP
Sbjct: 222 SDAYDP-VAMWL--RANARPFYDREAHAAPAPAPAPAAGGYGYP 262
>UniRef50_Q9VP73 Cluster: CG12976-PA; n=2; Sophophora|Rep:
CG12976-PA - Drosophila melanogaster (Fruit fly)
Length = 314
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 148 GLATDAADPYLATWLQYRAHGKKHYDAQSHQ---RPPGQQSSPRGGARYPIRP 297
G + ++ Y+ + +Y + HY +Q HQ P GQQ P YP RP
Sbjct: 47 GYGSSSSASYMPNYYRYAPYASPHY-SQHHQGMFTPAGQQIIPSSVLHYPPRP 98
>UniRef50_A6D6W3 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 336
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 95 IQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNP 262
+ L++ YP F+VG+D VG+ QQ +S + + KN + A ++ LD P
Sbjct: 278 LALIEAYPDRFMVGSDVVGAFGYQQTALSTWHPILSALPKNIADKMAYQNMLDVLP 333
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 31.9 bits (69), Expect = 2.9
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +2
Query: 62 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 241
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 242 D 244
+
Sbjct: 74 N 74
>UniRef50_UPI00015B47E9 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1066
Score = 31.5 bits (68), Expect = 3.8
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 89 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NP 262
++ +LL EY CF + + +G+ + RI L S + + K A+K LDN
Sbjct: 78 RLKKLLQEYADCFHLKGEKLGTSNFIKHRI-LTVSDVPICTKPYRFPHALKQELDNQIQE 136
Query: 263 ALEGG 277
LEGG
Sbjct: 137 MLEGG 141
>UniRef50_Q7NAE7 Cluster: PutA; n=1; Mycoplasma gallisepticum|Rep:
PutA - Mycoplasma gallisepticum
Length = 476
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +2
Query: 110 EYPKCFIVGADNVGSQQMQQ-------IRISLRGSSIVLMGKNTMMRKAIKDHL 250
+Y F G+ NVG + MQQ + + L G S ++ NT + KA+K L
Sbjct: 203 KYDHIFFTGSSNVGKKVMQQAATHLTPVTLELGGKSPCIVDTNTDLEKAVKSFL 256
>UniRef50_Q0LCN2 Cluster: Primosomal protein N'; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Primosomal protein N' -
Herpetosiphon aurantiacus ATCC 23779
Length = 829
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 50 REDKATWKSNYFVKIIQL--LDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
+E + TW+ + I+L LDE + + VG Q +Q+R+ LRGS L T
Sbjct: 108 QEIERTWRPTEHGQKIELGTLDERERAILFHLRRVGEQSERQLRVDLRGSDADLRRSYTE 167
Query: 224 MRK 232
+ +
Sbjct: 168 LHE 170
>UniRef50_A7HZV3 Cluster: Putative uncharacterized protein; n=1;
Campylobacter hominis ATCC BAA-381|Rep: Putative
uncharacterized protein - Campylobacter hominis (strain
ATCC BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
Length = 221
Score = 31.5 bits (68), Expect = 3.8
Identities = 12/44 (27%), Positives = 28/44 (63%)
Frame = +2
Query: 125 FIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN 256
F+ G NVG +++ +I L+G+ I+++ +NT+ + +++N
Sbjct: 65 FLSGECNVGEEEIDEISDFLKGTEILIIDENTLKFHTDRQNIEN 108
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 71 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 238
K +I + L++Y + N+ + +QQIR G S + +G N +M AI
Sbjct: 23 KDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLGNNKVMMIAI 78
>UniRef50_Q9H7N4 Cluster: Splicing factor, arginine/serine-rich 19;
n=8; Eutheria|Rep: Splicing factor, arginine/serine-rich
19 - Homo sapiens (Human)
Length = 1312
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 175 YLATWLQYRAHGKKHYDAQSHQRPPGQQSSP-RGGARYPIRPI 300
Y+ + +R HG+K D RPP + P +GG P+ P+
Sbjct: 1270 YVQRYRYFRKHGRKPGDPPGPPRPPKEPGPPDKGGPGLPLPPL 1312
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 62 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNTMMRKAI 238
A WK ++ +L+ YP +V ++ + + Q+R +R ++ + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 239 K 241
K
Sbjct: 65 K 65
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 31.5 bits (68), Expect = 3.8
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +2
Query: 62 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 241
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 242 D 244
+
Sbjct: 71 E 71
>UniRef50_Q63YF3 Cluster: Putative uncharacterized protein; n=30;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (Pseudomonas pseudomallei)
Length = 503
Score = 31.1 bits (67), Expect = 5.0
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 148 GLATDAADPYLATWLQYR---AHGKKHYDAQSHQRPPGQQSSPRGGA 279
G DA D LA L R + G + AQ RPPGQ P GGA
Sbjct: 201 GQMGDALDDALADLLAVRLPLSQGGRDALAQGAARPPGQPGQPAGGA 247
>UniRef50_A7QLM8 Cluster: Chromosome chr13 scaffold_120, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_120, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 1193
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/57 (22%), Positives = 32/57 (56%)
Frame = +2
Query: 119 KCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEGGPGTQ 289
+ +VG ++ + +Q + + +S L+G+ ++RK I +++NN ++ G G +
Sbjct: 700 RTLVVGMRDLNGSEFEQWKFAFETASTALIGRAALLRK-IASNIENNLSILGASGIE 755
>UniRef50_A7NVA4 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 333
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 157 TDAADPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRGGAR 282
T+AA WL+ R+H ++H++A++ PG++ + G R
Sbjct: 100 TEAARNRGRRWLRRRSHSREHWEAEADTGVPGRRRNNELGGR 141
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 31.1 bits (67), Expect = 5.0
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 17 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 196
R+ +L+R ++ K K+N K+ EYP +I+G ++ + ++++R +GS
Sbjct: 6 RAKVVSLTRTDKKTKED-KANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKGSK 64
Query: 197 IVLMGKNTMMRKAI 238
I GK ++ A+
Sbjct: 65 I-FFGKLKVLALAL 77
>UniRef50_UPI0000584055 Cluster: PREDICTED: similar to Zinc finger,
matrin type 5; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Zinc finger, matrin type 5 -
Strongylocentrotus purpuratus
Length = 184
Score = 30.7 bits (66), Expect = 6.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 151 LATDAADPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRGGA 279
LA D +P L WL R+ KK+ D+ S + P GG+
Sbjct: 102 LAADLPEPSLDDWLAKRSKRKKNKDSTSSSTSSSEGVHPSGGS 144
>UniRef50_O88037 Cluster: Putative serine/threonine protein kinase;
n=2; Streptomyces|Rep: Putative serine/threonine protein
kinase - Streptomyces coelicolor
Length = 930
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/29 (41%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -1
Query: 276 PPSRAGL-LSRWSLMALRIIVFFPMSTIL 193
PP R G+ + R++L LRI++F P++++L
Sbjct: 436 PPDRRGVAVDRYALACLRIVLFLPLTSLL 464
>UniRef50_A5N3U4 Cluster: Predicted hydrolase; n=1; Clostridium
kluyveri DSM 555|Rep: Predicted hydrolase - Clostridium
kluyveri DSM 555
Length = 317
Score = 30.7 bits (66), Expect = 6.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 122 CFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN 256
C IVG +N +++ +I I G + +M + +M K IKD L+N
Sbjct: 203 CIIVGVENTKNKEETKIDIG-DGPVLKIMDSSLIMHKDIKDILEN 246
>UniRef50_UPI00015B4584 Cluster: PREDICTED: similar to
retrotransposon protein, putative, Ty3-gypsy subclass;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
retrotransposon protein, putative, Ty3-gypsy subclass -
Nasonia vitripennis
Length = 537
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 89 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDN--NP 262
++ +LL EY CF + + +G+ + RI L S + + K A+K LDN
Sbjct: 73 RLKKLLQEYADCFHLKGEKLGTTNFIKHRI-LTVSDVPICTKPYRFPHALKQELDNQIQE 131
Query: 263 ALEGG 277
+EGG
Sbjct: 132 MIEGG 136
>UniRef50_Q5CVI9 Cluster: Secreted alpha beta hydrolase family
protein, signal peptide, duplicated adjacent gene; n=2;
Cryptosporidium|Rep: Secreted alpha beta hydrolase
family protein, signal peptide, duplicated adjacent gene
- Cryptosporidium parvum Iowa II
Length = 613
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = +2
Query: 5 LKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISL 184
L+FH Y T + E A + + + D++ KCFI+G G++ M ++
Sbjct: 99 LEFHNEIYPTKMNLEMEYLAKNNRSAMLSSMGTGDDHSKCFILGFSGYGNRGMWSAAVA- 157
Query: 185 RGSSIVLMGKNTMMR 229
+G + N +R
Sbjct: 158 KGLAFQFFDNNVPLR 172
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +2
Query: 8 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 187
K R+ L+++ ++++ K F I + + Y CF+ DN+ + ++ +R L
Sbjct: 3 KSKRAKVYNLTQVTKKNREQ-KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELN 61
Query: 188 GSSIVLMGKNTMMRKAI 238
I GK + +A+
Sbjct: 62 DCRI-FFGKTKLTARAL 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,865,805
Number of Sequences: 1657284
Number of extensions: 6785015
Number of successful extensions: 19931
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 19427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19924
length of database: 575,637,011
effective HSP length: 79
effective length of database: 444,711,575
effective search space used: 10228366225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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