Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310H09f
         (309 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.42 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   2.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   2.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   3.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   3.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   5.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    19   9.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    19   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.42
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +3

Query: 201  CSWEKTL*CAKPSKTTWTTIQPSRGGPVPNSPYSES 308
            C W+  + C    +       P  GGP P S  SE+
Sbjct: 1247 CDWKYKVKCVGRKQLAQKYQLPKMGGPQPYSACSEN 1282



 Score = 23.0 bits (47), Expect = 0.73
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +2

Query: 110  EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 238
            EYPKC+ V  +       +     +R  S     KN ++  A+
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAV 2485


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 217 HYDAQSHQRPPGQQSSPRG 273
           H     HQ+PP QQ   +G
Sbjct: 199 HQQGPPHQQPPIQQQPNQG 217


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 77  NYFVKIIQLLDEYPKCF 127
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 217 HYDAQSHQRPPGQQSSPRG 273
           H     HQ+PP QQ   +G
Sbjct: 201 HQQGPPHQQPPIQQQPNQG 219


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 119  KCFIVG--ADNVGSQQMQQIRISLR 187
            KC I    ADN  ++Q+++I+ SLR
Sbjct: 1086 KCMICTYKADNKENEQLRKIQESLR 1110


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 119  KCFIVG--ADNVGSQQMQQIRISLR 187
            KC I    ADN  ++Q+++I+ SLR
Sbjct: 1086 KCMICTYKADNKENEQLRKIQESLR 1110


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 154 ATDAADPYLATWLQYR 201
           ATD    Y+A+W  YR
Sbjct: 22  ATDKVICYVASWAIYR 37


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 148 GLATDAADPYLAT 186
           GLA DA+DP   T
Sbjct: 57  GLAFDASDPKFLT 69


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 148 GLATDAADPYLAT 186
           GLA DA+DP   T
Sbjct: 57  GLAFDASDPKFLT 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,715
Number of Sequences: 336
Number of extensions: 1618
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)