Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310H09f
(309 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 127 2e-30
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 127 2e-30
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 127 2e-30
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 127 2e-30
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 33 0.072
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 33 0.072
AE014296-3477|AAF51682.1| 314|Drosophila melanogaster CG12976-P... 32 0.13
AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p pro... 27 4.7
AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,... 27 4.7
AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,... 27 4.7
AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,... 27 4.7
AE014297-4613|AAN14237.1| 505|Drosophila melanogaster CG31371-P... 27 6.2
AE013599-1733|AAF58364.1| 611|Drosophila melanogaster CG13330-P... 27 6.2
BT023678-1|AAY85078.1| 162|Drosophila melanogaster IP04426p pro... 26 8.2
AE014134-2577|AAF53446.3| 162|Drosophila melanogaster CG15266-P... 26 8.2
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 127 bits (307), Expect = 2e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 224 MRKAIKDHLDNNPALE 271
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 127 bits (307), Expect = 2e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 224 MRKAIKDHLDNNPALE 271
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 127 bits (307), Expect = 2e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 224 MRKAIKDHLDNNPALE 271
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 127 bits (307), Expect = 2e-30
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = +2
Query: 44 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 223
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 224 MRKAIKDHLDNNPALE 271
MRKAI+ HL+NNP LE
Sbjct: 61 MRKAIRGHLENNPQLE 76
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.072
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 17 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 196
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 197 IVLMGKNTMMR 229
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.072
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 17 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 196
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 197 IVLMGKNTMMR 229
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AE014296-3477|AAF51682.1| 314|Drosophila melanogaster CG12976-PA
protein.
Length = 314
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 148 GLATDAADPYLATWLQYRAHGKKHYDAQSHQ---RPPGQQSSPRGGARYPIRP 297
G + ++ Y+ + +Y + HY +Q HQ P GQQ P YP RP
Sbjct: 47 GYGSSSSASYMPNYYRYAPYASPHY-SQHHQGMFTPAGQQIIPSSVLHYPPRP 98
>AY094811-1|AAM11164.1| 868|Drosophila melanogaster LD30050p
protein.
Length = 868
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 151 LATDAADPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRGGA 279
+AT P A H H +HQ PPG +P GA
Sbjct: 573 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 615
>AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,
isoform C protein.
Length = 1173
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 151 LATDAADPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRGGA 279
+AT P A H H +HQ PPG +P GA
Sbjct: 878 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 920
>AE014297-962|AAN13433.1| 868|Drosophila melanogaster CG9381-PB,
isoform B protein.
Length = 868
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 151 LATDAADPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRGGA 279
+AT P A H H +HQ PPG +P GA
Sbjct: 573 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 615
>AE014297-961|AAN13432.1| 868|Drosophila melanogaster CG9381-PA,
isoform A protein.
Length = 868
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 151 LATDAADPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRGGA 279
+AT P A H H +HQ PPG +P GA
Sbjct: 573 IATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGA 615
>AE014297-4613|AAN14237.1| 505|Drosophila melanogaster CG31371-PA
protein.
Length = 505
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 225 CAKPSKTTWTTIQPSRGGPVPNSPY 299
C + W +QPSR PV + PY
Sbjct: 307 CQLDGSSPWLLLQPSRLEPVSSDPY 331
>AE013599-1733|AAF58364.1| 611|Drosophila melanogaster CG13330-PA
protein.
Length = 611
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 169 DPYLATWLQYRAHGKKHYDAQSHQRPPGQQSSP 267
DP+ +R K Y Q++QRPP + P
Sbjct: 19 DPFKIHSYNFRYADKPFYPVQNYQRPPAAPTPP 51
>BT023678-1|AAY85078.1| 162|Drosophila melanogaster IP04426p
protein.
Length = 162
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 143 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 244
N+GS Q R+ S +V +GKN + +I D
Sbjct: 79 NIGSNVFMQARVRKMDSILVDVGKNVFLDMSIPD 112
>AE014134-2577|AAF53446.3| 162|Drosophila melanogaster CG15266-PA
protein.
Length = 162
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 143 NVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 244
N+GS Q R+ S +V +GKN + +I D
Sbjct: 79 NIGSNVFMQARVRKMDSILVDVGKNVFLDMSIPD 112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,097,678
Number of Sequences: 53049
Number of extensions: 310420
Number of successful extensions: 1454
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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