Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310H08f
         (490 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   192   4e-51
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.2  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   5.6  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   7.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    22   9.8  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    22   9.8  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   9.8  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  192 bits (469), Expect = 4e-51
 Identities = 91/127 (71%), Positives = 103/127 (81%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           G TYGKPKSHGVNQLKP R LQS+AEE           L+SYWVAQD+++KYFEVI+VDP
Sbjct: 78  GCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYWVAQDAAHKYFEVIMVDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            + AIRRDP +NWI NAVHKHRE+RGLTSAG+SSRGLGK +RYSQT GGSRRAA +RRN 
Sbjct: 138 PNNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNR 197

Query: 126 LQLRRKR 106
           L LRR R
Sbjct: 198 LHLRRYR 204


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 7   FFFSNNILLTHWLSICIQK*ANGKSLTVLDR 99
           F   N ILL  +L+I +   A+  SLT +++
Sbjct: 699 FICGNYILLNVFLAIAVDNLADADSLTTVEK 729


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 204 RGLGKGHRYSQTKGGSRR 151
           +G+G GH Y   + G RR
Sbjct: 320 KGVGSGHLYYYEENGDRR 337


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 341 HTSISRLSSWTRHTRPFVA 285
           HT  + L  W R  +PFVA
Sbjct: 201 HTKTALLYLWGRFVQPFVA 219


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +3

Query: 360  SKSSTHGDHRNDGQHAPQQWIEGCAWASTG 449
            S SST   H N   H+        +WA  G
Sbjct: 1089 SCSSTSSSHSNHSSHSSSSSNSAGSWAGMG 1118


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 190  LAETSGAATSRSQTTHLAMLMYSIHDPVDLRIATNGLV*RVHEDNLEIL 336
            +A+   A   ++   +L+  +  I++P DL IAT  ++   H    E L
Sbjct: 998  IAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMMLNGHTMKKEAL 1046


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 183  RYSQTKGGSRRAAWLRRNTLQL 118
            RY++T+  +RRAA  +R   +L
Sbjct: 1057 RYNETRNAARRAATQQRQAERL 1078


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,064
Number of Sequences: 2352
Number of extensions: 8309
Number of successful extensions: 52
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)