SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310H08f
         (490 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT019672-1|AAV38478.1|  204|Homo sapiens ribosomal protein L15 p...   186   5e-47
BC071672-1|AAH71672.1|  204|Homo sapiens ribosomal protein L15 p...   186   5e-47
BC070328-1|AAH70328.1|  204|Homo sapiens ribosomal protein L15 p...   186   5e-47
BC068198-1|AAH68198.1|  204|Homo sapiens ribosomal protein L15 p...   186   5e-47
BC030575-1|AAH30575.1|  219|Homo sapiens Similar to RIKEN cDNA 2...   186   5e-47
AY347528-1|AAQ24859.1|  204|Homo sapiens ribosomal protein L15 p...   186   5e-47
AL355137-1|CAI14965.1|  204|Homo sapiens ribosomal protein L15 p...   186   5e-47
AF283772-1|AAG15591.1|  204|Homo sapiens protein ( Homo sapiens ...   186   5e-47
AF279903-1|AAG44837.1|  204|Homo sapiens 60S ribosomal protein L...   185   6e-47
BC014837-1|AAH14837.1|  204|Homo sapiens ribosomal protein L15 p...   184   2e-46
AB061823-1|BAB79461.1|  204|Homo sapiens ribosomal protein L15 p...   184   2e-46
L25899-1|AAA36583.1|  205|Homo sapiens ribosomal protein L10 pro...   172   5e-43
BC081565-1|AAH81565.1|  145|Homo sapiens RPL15 protein protein.        53   6e-07
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.     33   0.53 

>BT019672-1|AAV38478.1|  204|Homo sapiens ribosomal protein L15
           protein.
          Length = 204

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>BC071672-1|AAH71672.1|  204|Homo sapiens ribosomal protein L15
           protein.
          Length = 204

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>BC070328-1|AAH70328.1|  204|Homo sapiens ribosomal protein L15
           protein.
          Length = 204

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>BC068198-1|AAH68198.1|  204|Homo sapiens ribosomal protein L15
           protein.
          Length = 204

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>BC030575-1|AAH30575.1|  219|Homo sapiens Similar to RIKEN cDNA
           2510008H07 gene protein.
          Length = 219

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 93  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 152

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 153 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 212

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 213 LQLHRYR 219


>AY347528-1|AAQ24859.1|  204|Homo sapiens ribosomal protein L15
           protein.
          Length = 204

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>AL355137-1|CAI14965.1|  204|Homo sapiens ribosomal protein L15
           pseudogene 3 protein.
          Length = 204

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERVGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>AF283772-1|AAG15591.1|  204|Homo sapiens protein ( Homo sapiens
           clone TCBAP0781 mRNA sequence. ).
          Length = 204

 Score =  186 bits (452), Expect = 5e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>AF279903-1|AAG44837.1|  204|Homo sapiens 60S ribosomal protein L15
           protein.
          Length = 204

 Score =  185 bits (451), Expect = 6e-47
 Identities = 87/127 (68%), Positives = 97/127 (76%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSLAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>BC014837-1|AAH14837.1|  204|Homo sapiens ribosomal protein L15
           protein.
          Length = 204

 Score =  184 bits (447), Expect = 2e-46
 Identities = 87/127 (68%), Positives = 96/127 (75%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK+FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH+   T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKSHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>AB061823-1|BAB79461.1|  204|Homo sapiens ribosomal protein L15
           protein.
          Length = 204

 Score =  184 bits (447), Expect = 2e-46
 Identities = 87/127 (68%), Positives = 96/127 (75%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKAFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI   VHKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197

Query: 126 LQLRRKR 106
           LQL R R
Sbjct: 198 LQLHRYR 204


>L25899-1|AAA36583.1|  205|Homo sapiens ribosomal protein L10
           protein.
          Length = 205

 Score =  172 bits (419), Expect = 5e-43
 Identities = 81/120 (67%), Positives = 90/120 (75%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDP 307
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYWV +DS+YK FEVIL+DP
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKAFEVILIDP 137

Query: 306 SHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNT 127
            HKAIRR+P   WI    HKHREMRGLTSAGR SRGLGKGH++  T GGSRRAAW RRNT
Sbjct: 138 FHKAIRRNPDTQWITKPDHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNT 197


>BC081565-1|AAH81565.1|  145|Homo sapiens RPL15 protein protein.
          Length = 145

 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 26/48 (54%), Positives = 30/48 (62%)
 Frame = -2

Query: 486 GATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDS 343
           GATYGKP  HGVNQLK  R+LQS+AEE           L+SYW+   S
Sbjct: 78  GATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWMESHS 125


>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
          Length = 1315

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 14/34 (41%), Positives = 24/34 (70%)
 Frame = -2

Query: 255 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSR 154
           ++++R  +  +S GR SRG G+G+R   ++GGSR
Sbjct: 236 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 269


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,371,648
Number of Sequences: 237096
Number of extensions: 1357504
Number of successful extensions: 6457
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6457
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -