Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310H06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0089 - 6668179-6668316,6668386-6668565,6668648-6668729,666... 185 2e-47
06_01_0035 + 358669-359007,359458-359617,359723-360582 43 2e-04
02_05_0138 - 26190110-26191038,26191123-26191221,26191388-261915... 33 0.14
11_02_0028 + 7517196-7517206,7517256-7517312,7517423-7517503,751... 31 0.42
11_05_0015 + 18403367-18403729,18404500-18404565,18405121-184052... 30 0.98
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 30 1.3
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 29 3.0
10_07_0007 - 11768692-11768730,11768960-11769248,11769331-117695... 28 4.0
07_03_0528 + 19086835-19087363,19087514-19087539,19087753-190880... 28 4.0
03_02_0367 + 7834072-7834479,7834555-7834779,7834858-7835082,783... 28 4.0
04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925 28 5.2
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 27 6.9
01_06_1752 + 39659914-39659942,39660195-39660306,39660348-396605... 27 6.9
10_03_0036 - 7286425-7286463,7286686-7286974,7287306-7288192,728... 27 9.1
01_06_1127 - 34699119-34699360,34699446-34699689,34699773-346998... 27 9.1
>02_02_0089 -
6668179-6668316,6668386-6668565,6668648-6668729,
6669317-6669405,6669503-6669580,6670502-6670559,
6670727-6670956,6671174-6671318,6671417-6671458,
6671681-6671853
Length = 404
Score = 185 bits (451), Expect = 2e-47
Identities = 84/168 (50%), Positives = 121/168 (72%)
Frame = -3
Query: 507 PRSKQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFII 328
PRSK+LL+DEGS+IL+Y+TGHGGD FLKFQDSEE+ S +LADA++QM +K R+ E+ ++
Sbjct: 146 PRSKRLLSDEGSHILLYMTGHGGDEFLKFQDSEELQSHDLADAVKQMKEKHRFKELLIMV 205
Query: 327 DTCQASSMYEKFYSPNILATASSLVGEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPN 148
DTCQA++++ + SP +L SS+ GE+S SHH+DS IGV ++DR+T+Y L F E ++
Sbjct: 206 DTCQAATLFSQLQSPGVLTIGSSMKGENSYSHHLDSDIGVSVVDRFTFYTLAFFEKLNMY 265
Query: 147 SKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPITDFFGSVRPVI 4
S +++ S LST R DL+ R ++VP+T+FFGSV I
Sbjct: 266 SNASLNSLFNSYNPSMLLSTAYYRMDLYERPLNEVPVTNFFGSVMNTI 313
>06_01_0035 + 358669-359007,359458-359617,359723-360582
Length = 452
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Frame = -3
Query: 498 KQLLTDEGSNILIYLTGHGGDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTC 319
K + + +I +Y + HG G++ + + +L+ AL+ Y + ++ C
Sbjct: 143 KVISSGPNDHIFVYYSDHGSPGYVCMPSGGNLHANDLSQALKNKNAAGAYKNLVVYVEAC 202
Query: 318 QASSMYEKFYSPN---ILATASSLVGEDSLSHHVDS-AIGVYIIDRYTYYVLEFLENVHP 151
++ SM+E P+ + A +S E+S + + D+ + D ++ +E + P
Sbjct: 203 ESGSMFEGQLLPSNIGVYAMTASNATENSWATYCDTPEYNTCLGDLFSVAWMEDADARRP 262
Query: 150 NSKRTMSEFLAVCPKSACLSTVGVRKDL 67
T+ + + K LS V DL
Sbjct: 263 GDPETLGQLYDIVAKRTNLSHVSRYGDL 290
>02_05_0138 -
26190110-26191038,26191123-26191221,26191388-26191518,
26191622-26191756,26191836-26191933,26192747-26192919,
26193027-26193411
Length = 649
Score = 33.1 bits (72), Expect = 0.14
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 441 GDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATA 265
GDG F +T++ L + + KK +E F+I Q + K Y PN LA A
Sbjct: 312 GDGLYHFIKVTGITAKSLHERSNRRHAKKATDEDTFVIADMQRDEFFNKDYIPNWLAYA 370
>11_02_0028 +
7517196-7517206,7517256-7517312,7517423-7517503,
7518009-7518108,7518454-7518507,7519045-7519115,
7519248-7519455,7519647-7519700,7519934-7520025,
7520090-7520285,7521158-7521339,7521429-7521496,
7522848-7522920,7523010-7523071,7523155-7524079,
7524843-7525133,7525601-7525871
Length = 931
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 432 FLKFQDSEEVTSQEL-ADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNIL 274
+ + D + + S + AD L W K +F I+D +A S EK YS N++
Sbjct: 722 YFNYDDGDNIMSASIHADQLAGQWYAKACG-LFPIVDKDKAESALEKIYSFNVM 774
>11_05_0015 +
18403367-18403729,18404500-18404565,18405121-18405234,
18406109-18406297,18406335-18406667,18406708-18406743,
18407806-18407919,18408506-18408999,18409293-18409716
Length = 710
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 315 ASSMYEKFYSPNILATASSLVGEDSLSHHVDSAIGVYIIDRY 190
A + Y S N ++ A++L G+ SLS HV SA G Y Y
Sbjct: 506 AHTAYSSLPSANNISMANNLYGQQSLSDHV-SATGYYTAPYY 546
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -1
Query: 212 VYTSLIDTHTMCWSFWKMFTLTAKGLCRNFWLYVRKVLAYRQWEYEKI 69
+ +++DT +C +W LTA + + +KV + +WE +K+
Sbjct: 320 IVNAMLDTTGLCKEWWGEAVLTACYVLNKIPMKHKKVTPFEEWERKKL 367
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 28.7 bits (61), Expect = 3.0
Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = -3
Query: 441 GDGFLKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATAS 262
GD D++ L D ++M + E+ +++ + ++Y+K P LAT
Sbjct: 378 GDARETIMDAQNALGDILLDDGDRMVNALQA-ELLRLLEYMETQALYDKLGHPYALATII 436
Query: 261 SLVGEDSLSHHVDSAIGVYIIDRYTYYVLE---FLENVH---PNSKRTMSEFLAVCPKSA 100
S + + + I +Y+ R Y+ + F EN P++ + + +A P +A
Sbjct: 437 SHRRQRAAGRGDEEVISLYVTPRMIAYLAQAKKFEENPEAPVPSADEDVKQEMAANPLAA 496
Query: 99 CLSTVG 82
+ +G
Sbjct: 497 ISAPLG 502
>10_07_0007 -
11768692-11768730,11768960-11769248,11769331-11769501,
11769580-11769785
Length = 234
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 252 GEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLSTV 85
G D+L H D + I D+ +YV + ++ +T++EF A+ + C +TV
Sbjct: 179 GHDTLIHKKDFPVKQQIGDQCGFYVCHNMRLLYREKVKTLAEFEAM--MNTCYATV 232
>07_03_0528 +
19086835-19087363,19087514-19087539,19087753-19088064,
19088152-19089038,19089370-19089658,19089744-19089782,
19089888-19089926
Length = 706
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -3
Query: 252 GEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKSACLS 91
G D+L H D + I+D+ ++V + ++ +T++EF KS S
Sbjct: 638 GHDTLIHKKDFPVKQQIVDQCGFHVCHNMRLLYREKVKTLAEFEGTITKSLSTS 691
>03_02_0367 +
7834072-7834479,7834555-7834779,7834858-7835082,
7835333-7836219,7836298-7836468,7836551-7836839,
7836925-7836963,7837069-7837107
Length = 760
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -3
Query: 255 VGEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAVCPKS 103
+G D+L H D + I D+ +YV + ++ + +T++EF KS
Sbjct: 691 IGHDTLIHKKDFPVKQQIGDQCRFYVCHNMRLLYRDKVKTLAEFEGTIIKS 741
>04_01_0603 - 7931162-7931446,7932217-7932718,7932824-7934925
Length = 962
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -3
Query: 429 LKFQDSEEVTSQELADALEQMWQKKRYNEIFFIIDTCQASSMYEKFYSPNILATA 265
LK + E ++ + L+ +W ++ YN+I QAS + S ++ A A
Sbjct: 266 LKEKFKENISDRRCLIVLDDVWDREAYNQIHDAFQNLQASRIIITTRSKHVAALA 320
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 342 FHYIFFSATFVPKHQQALGWSLLLSPET*GSRHHHGL 452
F Y+ SAT P + L LL++PE HHG+
Sbjct: 1137 FPYVNLSATVSPITRTVLKVDLLITPEFLWRDRHHGM 1173
>01_06_1752 +
39659914-39659942,39660195-39660306,39660348-39660533,
39660918-39661022,39661147-39661230,39661416-39661531,
39661636-39661737,39661816-39661929,39662323-39662389,
39662457-39662510,39662899-39662973,39663057-39663092,
39663490-39663591
Length = 393
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 32 SVIGTLLGSLLNKSFRTPTVDKQALFGHTAKNSDIVLLL 148
+VIG +LG L SF T V K LF K +D +L L
Sbjct: 26 AVIGVMLGYLFGISFPTVNVTKPLLF--REKRTDCILQL 62
>10_03_0036 -
7286425-7286463,7286686-7286974,7287306-7288192,
7288280-7288726,7288805-7288830,7288984-7289512
Length = 738
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 252 GEDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKRTMSEFLAV 115
G D+L H D ++ I D+ +YV + ++ +T++EF A+
Sbjct: 683 GHDTLIHKKDFSVKQQIGDQCGFYVCHNMRLLYREKVKTLAEFEAM 728
>01_06_1127 -
34699119-34699360,34699446-34699689,34699773-34699844,
34700123-34700218,34700322-34700438,34700520-34700676,
34700770-34700867,34700940-34701098,34701169-34701339,
34701402-34701479,34701548-34701667,34701968-34702085,
34702216-34702346,34702452-34702528,34702858-34702969,
34703057-34703239,34703416-34703517,34703617-34703718,
34703817-34703912,34704481-34704558,34704652-34704744,
34704817-34704938,34705035-34705116,34705204-34705278,
34705385-34705645,34705730-34705854,34705956-34706031,
34706128-34706277,34706359-34706454,34706707-34706814,
34706956-34707056,34707727-34707814,34707894-34708006,
34708278-34708383,34709143-34709247,34709356-34709427,
34709931-34709971,34710067-34710175,34710252-34710317,
34710404-34710540,34710788-34710890,34711416-34711535,
34711707-34711820,34711923-34712008,34712088-34712170,
34713283-34713347,34713444-34713621,34713697-34713776,
34714926-34715049,34715140-34715245,34715399-34715561
Length = 1966
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 180 VLEFLENVHPNSKRTMSEFLAVCPKSACLSTVGVRKDLFNRDPSKVPI 37
+LE L+ P +S+ L KS C++ + V +D+ +KVP+
Sbjct: 372 LLEKLKEKKPTMTEALSQTLQAMHKSGCITLLDVIEDVRVAVKNKVPL 419
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,704,204
Number of Sequences: 37544
Number of extensions: 271533
Number of successful extensions: 661
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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