Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310H06f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.36 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.62 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    24   0.82 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   1.9  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   2.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.8  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -3

Query: 474 SNILIYLTGHGGDGFLKFQDSEE 406
           +N L+Y+  H GD  + +Q++++
Sbjct: 197 ANTLVYMADHKGDALIVYQNADD 219


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 249 EDSLSHHVDSAIGVYIIDRYTYYVLEFLENVHPNSKR 139
           E S +H        YI+D YT  ++EFL+    + +R
Sbjct: 11  EISKNHKEQLISNDYILDNYTSPIVEFLQQEDSSIRR 47



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 11  GLTEPKKSVIGTLLGSLLNK 70
           GLTEPKK     L  S +NK
Sbjct: 428 GLTEPKKDNKRKLSDSTMNK 447


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 362 CHICSKASASSWLV 403
           CH+C KA +  WL+
Sbjct: 45  CHLCGKAFSRPWLL 58


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -3

Query: 474 SNILIYLTGHGGDGFLKFQDSEE 406
           +N ++Y+    G+G + +Q+S++
Sbjct: 202 TNTMVYIADEKGEGLIMYQNSDD 224


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 471 NILIYLTGHGGDGFLKFQDSEE 406
           N ++Y+    GD  + +Q+S+E
Sbjct: 201 NTIVYMADDKGDALIVYQNSDE 222


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 119 LYVRKVLAYRQWEYEKIYSIEILVKCLSPTSLVQLDQ 9
           ++ +KVL    W+Y+ I   E+L    +  S+V ++Q
Sbjct: 61  IHRKKVLLSVWWDYKGIVYFELLSPNRTINSVVYIEQ 97


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 119 LYVRKVLAYRQWEYEKIYSIEILVKCLSPTSLVQLDQ 9
           ++ +KVL    W+Y+ I   E+L    +  S+V ++Q
Sbjct: 183 IHRKKVLLSVWWDYKGIVYFELLPPNRTINSVVYIEQ 219


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -3

Query: 516 PDTPRSKQLLTDEGSNILIYLTGHGGDGF 430
           PD       L  E  N+L +    G DGF
Sbjct: 192 PDLNYRSAALDQEMKNVLTFWMNRGVDGF 220


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,248
Number of Sequences: 438
Number of extensions: 3421
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)