Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310H03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.71 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.71 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.71 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    24   0.94 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   3.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 26  WNIPTIEKIVPLLDNYERSTLVNEHVT 106
           W   T+  I+ LL +YE +  +NE+++
Sbjct: 620 WMPSTMANILDLLMDYEHTVKINENIS 646



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 160 CYEAFNEFFERKR 198
           C E FNEF+ ++R
Sbjct: 606 CPEGFNEFYNQRR 618


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 26  WNIPTIEKIVPLLDNYERSTLVNEHVT 106
           W   T+  I+ LL +YE +  +NE+++
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENIS 879



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 160 CYEAFNEFFERKR 198
           C E FNEF+ ++R
Sbjct: 839 CPEGFNEFYNQRR 851


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 26  WNIPTIEKIVPLLDNYERSTLVNEHVT 106
           W   T+  I+ LL +YE +  +NE+++
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENIS 879



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 160 CYEAFNEFFERKR 198
           C E FNEF+ ++R
Sbjct: 839 CPEGFNEFYNQRR 851


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 125 ENAFMDAIMATS-VMRHLMNFLKEKGYVTPD 214
           +N  +D I+ +  ++++ +N L EKG  TPD
Sbjct: 29  DNVDLDEIIKSDRLLKNYVNCLLEKGKCTPD 59


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 505  VPNEHRVNRLVHSLLGEVEFNHCS 434
            VP+ H  N     +LGE+   +C+
Sbjct: 1109 VPDPHNCNAYYRCVLGELRKQYCA 1132


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/41 (21%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 125 ENAFMDAIMATS-VMRHLMNFLKEKGYVTPDPRQQRDFVKQ 244
           +N  +D I++   ++++ +N L +KG  TP+ ++ +  + +
Sbjct: 24  DNIDIDDILSNERLLKNYVNCLLDKGRCTPEGKKLKSTIPE 64


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 172 MPHNTCGHDG 143
           MPHN   HDG
Sbjct: 134 MPHNLTRHDG 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,797
Number of Sequences: 336
Number of extensions: 2810
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)