Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310H03f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1527|AAF47979.1| 592|Drosophila melanogaster CG2145-PA... 211 5e-55
AY075327-1|AAL68194.1| 204|Drosophila melanogaster GH10845p pro... 200 1e-51
BT001644-1|AAN71399.1| 322|Drosophila melanogaster RE41114p pro... 136 1e-32
AY051910-1|AAK93334.1| 322|Drosophila melanogaster LD39912p pro... 136 1e-32
AE014297-2108|AAF55248.2| 322|Drosophila melanogaster CG3303-PA... 136 1e-32
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 29 3.8
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 29 3.8
U04246-1|AAA62472.1| 1284|Drosophila melanogaster putative potas... 29 5.1
AE013599-2592|AAF57772.2| 1284|Drosophila melanogaster CG5076-PA... 29 5.1
AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p pro... 28 6.7
AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid horm... 28 6.7
AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator tra... 28 6.7
AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA... 28 6.7
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 8.8
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 28 8.8
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 28 8.8
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 28 8.8
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 28 8.8
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 28 8.8
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 28 8.8
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 28 8.8
>AE014298-1527|AAF47979.1| 592|Drosophila melanogaster CG2145-PA
protein.
Length = 592
Score = 211 bits (515), Expect = 5e-55
Identities = 92/167 (55%), Positives = 121/167 (72%)
Frame = +2
Query: 2 LLNISSAAWNIPTIEKIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMN 181
LL + S A PTI K+ L +NYE T VNEHVTP ER EEN F+DA+MAT VMR M
Sbjct: 373 LLTVDSKALESPTIVKMRLLFNNYEHDTHVNEHVTPNERKEENDFLDAVMATPVMRQAML 432
Query: 182 FLKEKGYVTPDPRQQRDFVKQLWFSLYSRGKGKISSSGFEHIFVSELKNGEVSGLHNWIY 361
FL++KG V+PDP+ RD VK+LWF+ YSRG+GKI SSGFEH+FV E+K+G + G HNW+Y
Sbjct: 433 FLQQKGVVSPDPKTHRDLVKELWFTQYSRGQGKIGSSGFEHVFVYEVKDGTIIGFHNWVY 492
Query: 362 FSKEEAANRLNYLGYLKYRQFGERGAVIKFHFTQQGVDKPVNSMFIG 502
EE R +Y GY+K + G +G ++K F+ QG++KPVN++F+G
Sbjct: 493 IGDEEKDGRFDYKGYMKEQDIGTKGKIVKIRFSHQGLNKPVNTVFVG 539
>AY075327-1|AAL68194.1| 204|Drosophila melanogaster GH10845p
protein.
Length = 204
Score = 200 bits (487), Expect = 1e-51
Identities = 84/148 (56%), Positives = 111/148 (75%)
Frame = +2
Query: 59 LLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDPRQQRDFV 238
L +NYE T VNEHVTP ER EEN F+DA+MAT VMR M FL++KG V+PDP+ RD V
Sbjct: 4 LFNNYEHDTHVNEHVTPNERKEENDFLDAVMATPVMRQAMLFLQQKGVVSPDPKTHRDLV 63
Query: 239 KQLWFSLYSRGKGKISSSGFEHIFVSELKNGEVSGLHNWIYFSKEEAANRLNYLGYLKYR 418
K+LWF+ YSRG+GKI SSGFEH+FV E+K+G + G HNW+Y EE R +Y GY+K +
Sbjct: 64 KELWFTQYSRGQGKIGSSGFEHVFVYEVKDGTIIGFHNWVYIGDEEKDGRFDYKGYMKEQ 123
Query: 419 QFGERGAVIKFHFTQQGVDKPVNSMFIG 502
G +G ++K F+ QG++KPVN++F+G
Sbjct: 124 DIGTKGKIVKIRFSHQGLNKPVNTVFVG 151
>BT001644-1|AAN71399.1| 322|Drosophila melanogaster RE41114p
protein.
Length = 322
Score = 136 bits (330), Expect = 1e-32
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 1/156 (0%)
Frame = +2
Query: 38 TIEKIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDP 217
T ++ L DNYE V EH TP+ E+ F+ A+M T VM+ M FL K V+ +
Sbjct: 112 TTALLMRLFDNYELDVAVQEHPTPEHVQEQYDFLRAVMGTRVMKLTMRFLVHKDIVSVEY 171
Query: 218 RQQRDFVKQLWFSLYSRGKGKISSSGFEHIFVSELKNGEVSGLHNWIYFSKEEAANRLNY 397
Q +++LWF+ YSRG+G + SS FEH+F++E+++ +V GLHNW+YF+ +E ++Y
Sbjct: 172 DDQLRLLQELWFTPYSRGRGIVGSSSFEHVFMAEIRDQKVLGLHNWLYFADQEQRGNVDY 231
Query: 398 LGYLKYRQFGERG-AVIKFHFTQQGVDKPVNSMFIG 502
G+L +++ G+ V+ +T ++KPVN F+G
Sbjct: 232 KGWLNHKEMGKHNQMVLSVRYTFHNINKPVNGFFVG 267
>AY051910-1|AAK93334.1| 322|Drosophila melanogaster LD39912p
protein.
Length = 322
Score = 136 bits (330), Expect = 1e-32
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 1/156 (0%)
Frame = +2
Query: 38 TIEKIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDP 217
T ++ L DNYE V EH TP+ E+ F+ A+M T VM+ M FL K V+ +
Sbjct: 112 TTALLMRLFDNYELDVAVQEHPTPEHVQEQYDFLRAVMGTRVMKLTMRFLVHKDIVSVEY 171
Query: 218 RQQRDFVKQLWFSLYSRGKGKISSSGFEHIFVSELKNGEVSGLHNWIYFSKEEAANRLNY 397
Q +++LWF+ YSRG+G + SS FEH+F++E+++ +V GLHNW+YF+ +E ++Y
Sbjct: 172 DDQLRLLQELWFTPYSRGRGIVGSSSFEHVFMAEIRDQKVLGLHNWLYFADQEQRGNVDY 231
Query: 398 LGYLKYRQFGERG-AVIKFHFTQQGVDKPVNSMFIG 502
G+L +++ G+ V+ +T ++KPVN F+G
Sbjct: 232 KGWLNHKEMGKHNQMVLSVRYTFHNINKPVNGFFVG 267
>AE014297-2108|AAF55248.2| 322|Drosophila melanogaster CG3303-PA
protein.
Length = 322
Score = 136 bits (330), Expect = 1e-32
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 1/156 (0%)
Frame = +2
Query: 38 TIEKIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDP 217
T ++ L DNYE V EH TP+ E+ F+ A+M T VM+ M FL K V+ +
Sbjct: 112 TTALLMRLFDNYELDVAVQEHPTPEHVQEQYDFLRAVMGTRVMKLTMRFLVHKDIVSVEY 171
Query: 218 RQQRDFVKQLWFSLYSRGKGKISSSGFEHIFVSELKNGEVSGLHNWIYFSKEEAANRLNY 397
Q +++LWF+ YSRG+G + SS FEH+F++E+++ +V GLHNW+YF+ +E ++Y
Sbjct: 172 DDQLRLLQELWFTPYSRGRGIVGSSSFEHVFMAEIRDQKVLGLHNWLYFADQEQRGNVDY 231
Query: 398 LGYLKYRQFGERG-AVIKFHFTQQGVDKPVNSMFIG 502
G+L +++ G+ V+ +T ++KPVN F+G
Sbjct: 232 KGWLNHKEMGKHNQMVLSVRYTFHNINKPVNGFFVG 267
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Frame = +2
Query: 32 IPTIEKIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTP 211
IP ++ +P +D + + V E ++ + HL+ K TP
Sbjct: 15393 IPKSKRTIPTIDEQSAKLTIKKVVDDDEGEYTVKLVNPVGEAEASLHLVIMRKPTAPGTP 15452
Query: 212 DPRQ-QRDFVKQLWFSLYSRGKGKISSSGFEHIFVSELKNGEVSGLHNWIY 361
P + D + W + GK +I E+ V E K E+ + + Y
Sbjct: 15453 QPLEIMHDSITLYWKAPEDDGKSEIIEYILEYQDVKEEKWTEIRKIKDTTY 15503
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Frame = +2
Query: 32 IPTIEKIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTP 211
IP ++ +P +D + + V E ++ + HL+ K TP
Sbjct: 17252 IPKSKRTIPTIDEQSAKLTIKKVVDDDEGEYTVKLVNPVGEAEASLHLVIMRKPTAPGTP 17311
Query: 212 DPRQ-QRDFVKQLWFSLYSRGKGKISSSGFEHIFVSELKNGEVSGLHNWIY 361
P + D + W + GK +I E+ V E K E+ + + Y
Sbjct: 17312 QPLEIMHDSITLYWKAPEDDGKSEIIEYILEYQDVKEEKWTEIRKIKDTTY 17362
>U04246-1|AAA62472.1| 1284|Drosophila melanogaster putative
potassium channel subunit protein.
Length = 1284
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 128 NAFMDAIMATSVMRHLMN-FLKEKGYVTPDPRQQRDFVKQLWFSLYSRGKGKISSSGFEH 304
+ ++A+ ++ + F+ KG V + +Q + WF+L +++ F+H
Sbjct: 302 DVIVEALFIVDILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFAL-----DLLAALPFDH 356
Query: 305 IFVSELKNGEVSGLH 349
++ S+L +GE S +H
Sbjct: 357 LYASDLYDGEDSHIH 371
>AE013599-2592|AAF57772.2| 1284|Drosophila melanogaster CG5076-PA
protein.
Length = 1284
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 128 NAFMDAIMATSVMRHLMN-FLKEKGYVTPDPRQQRDFVKQLWFSLYSRGKGKISSSGFEH 304
+ ++A+ ++ + F+ KG V + +Q + WF+L +++ F+H
Sbjct: 302 DVIVEALFIVDILLNFRTTFVSRKGEVVSNSKQIAINYLRGWFAL-----DLLAALPFDH 356
Query: 305 IFVSELKNGEVSGLH 349
++ S+L +GE S +H
Sbjct: 357 LYASDLYDGEDSHIH 371
>AY118662-1|AAM50031.1| 642|Drosophila melanogaster SD10038p
protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +2
Query: 65 DNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDP-RQQRDFVK 241
D + +T E + P + N DA+ V+ +++ K+K Y+ DP ++ D K
Sbjct: 67 DEDKDATQFQESLWPWDA-VRNKLKDALTEICVLSDVISIAKDKRYLVLDPLLEEADDTK 125
Query: 242 QLWFSLYSRGK-----GKISSSGFEHI--FVSELKNGEVSGLH 349
+ +YSR K ++ SG E + SE +N VS H
Sbjct: 126 PI-VQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFH 167
>AF289995-1|AAG02460.1| 642|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP80 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +2
Query: 65 DNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDP-RQQRDFVK 241
D + +T E + P + N DA+ V+ +++ K+K Y+ DP ++ D K
Sbjct: 67 DEDKDATQFQESLWPWDA-VRNKLKDALTEICVLSDVISIAKDKRYLVLDPLLEEADDTK 125
Query: 242 QLWFSLYSRGK-----GKISSSGFEHI--FVSELKNGEVSGLH 349
+ +YSR K ++ SG E + SE +N VS H
Sbjct: 126 PI-VQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFH 167
>AF244916-1|AAF63336.1| 642|Drosophila melanogaster mediator
transcriptional cofactorTRAP80 protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +2
Query: 65 DNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDP-RQQRDFVK 241
D + +T E + P + N DA+ V+ +++ K+K Y+ DP ++ D K
Sbjct: 67 DEDKDATQFQESLWPWDA-VRNKLKDALTEICVLSDVISIAKDKRYLVLDPLLEEADDTK 125
Query: 242 QLWFSLYSRGK-----GKISSSGFEHI--FVSELKNGEVSGLH 349
+ +YSR K ++ SG E + SE +N VS H
Sbjct: 126 PI-VQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFH 167
>AE014297-2456|AAF55506.1| 642|Drosophila melanogaster CG7957-PA
protein.
Length = 642
Score = 28.3 bits (60), Expect = 6.7
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +2
Query: 65 DNYERSTLVNEHVTPQERNEENAFMDAIMATSVMRHLMNFLKEKGYVTPDP-RQQRDFVK 241
D + +T E + P + N DA+ V+ +++ K+K Y+ DP ++ D K
Sbjct: 67 DEDKDATQFQESLWPWDA-VRNKLKDALTEICVLSDVISIAKDKRYLVLDPLLEEADDTK 125
Query: 242 QLWFSLYSRGK-----GKISSSGFEHI--FVSELKNGEVSGLH 349
+ +YSR K ++ SG E + SE +N VS H
Sbjct: 126 PI-VQVYSRKKAISQAAQVLLSGAERLRNAHSEQRNRNVSDFH 167
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSRPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSKPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSRPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSRPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSRPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSRPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSKPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1149 NVPALMPSRPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1195
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234
protein.
Length = 1228
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 38 TIEKIVPLLDN----YERSTLVNEHVTPQERNEENAFMDAI 148
T+++ + L+ N +ER TL EH+ +R E AF DA+
Sbjct: 659 TLQEALILISNHFCDFERQTLFIEHIVQDKRTEWLAFGDAL 699
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p protein.
Length = 1640
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1135 NVPALMPSKPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1181
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 38 TIEKIVPLLDN----YERSTLVNEHVTPQERNEENAFMDAI 148
T+++ + L+ N +ER TL EH+ +R E AF DA+
Sbjct: 666 TLQEALILISNHFCDFERQTLFIEHIVQDKRTEWLAFGDAL 706
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 38 TIEKIVPLLDN----YERSTLVNEHVTPQERNEENAFMDAI 148
T+++ + L+ N +ER TL EH+ +R E AF DA+
Sbjct: 666 TLQEALILISNHFCDFERQTLFIEHIVQDKRTEWLAFGDAL 706
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 38 TIEKIVPLLDN----YERSTLVNEHVTPQERNEENAFMDAI 148
T+++ + L+ N +ER TL EH+ +R E AF DA+
Sbjct: 666 TLQEALILISNHFCDFERQTLFIEHIVQDKRTEWLAFGDAL 706
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1156 NVPALMPSKPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1202
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 NISSAAWNIPTIE-KIVPLLDNYERSTLVNEHVTPQERNEENAFMDAIMATS 160
N+ + + PT+ K+ PLL + T+ EH+TP E+ E F+ AI A+S
Sbjct: 1156 NVPALMPSKPTVRGKVKPLL--ILQKTVSKEHITPAEQGE---FLAAITASS 1202
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,169,883
Number of Sequences: 53049
Number of extensions: 501816
Number of successful extensions: 1168
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -