Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310H01f
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 97 6e-21
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 41 6e-04
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 41 6e-04
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 38 0.005
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 36 0.022
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 36 0.022
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.35
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.35
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.61
AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical ... 29 2.5
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 4.3
AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensor... 28 4.3
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 28 4.3
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 4.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 4.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 4.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 4.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 4.3
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 27 5.7
Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical pr... 27 7.6
AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate cyc... 27 7.6
AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble guany... 27 7.6
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 27 10.0
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 27 10.0
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 27 10.0
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 27 10.0
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 27 10.0
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 97.1 bits (231), Expect = 6e-21
Identities = 60/143 (41%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Frame = +3
Query: 93 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGGPASXXXXXXXXXXGGIPKEVRCSHLLV 272
LP GWE R+SRS YY N T +SQWE+P A G K V+C HLLV
Sbjct: 6 LPAGWEKRQSRSNDRVYYFNTATGRSQWERPDESA--------FGKGSELKSVQCLHLLV 57
Query: 273 KHSGSRRPSSWREEHITRTKEEALDIL-------XEYRRKIID---XEAXF*RAGKYIF* 422
KH GSR PSSWR +HITR+K++A++IL Y +++ D E F K
Sbjct: 58 KHDGSRNPSSWRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSD 117
Query: 423 LVISKT*WGIWGRFKKGQMQKPF 491
+K G G F++ QMQKPF
Sbjct: 118 CSSAKR-GGDLGPFERRQMQKPF 139
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 45 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 185
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 72 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 185
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 60 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 185
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 45 FPAQRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 185
F Q+ N A LPEGWE R+ +T Y++N + +QWE P
Sbjct: 310 FLLQQNNFSADDPLGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 72 ASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 185
A+ EE LP+GWE R + G YY++ TK + WE+P
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERP 250
Score = 35.5 bits (78), Expect = 0.022
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +3
Query: 60 TNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKP 185
T + STQ LP+GWE R+ G YY++ +T+ + W++P
Sbjct: 246 TWERPSTQP--LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 102 GWEARKSRSTGMTYYLNKHTKKSQWEKPG-GPASXXXXXXXXXXGGIPKEVR 254
GW + S S+G YY NK T+ SQW+KP PA GG+ ++ R
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKPAEWPAEGGSAERDKPKGGVNEKPR 60
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 27 RKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 185
+K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1323 QKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 35.5 bits (78), Expect = 0.022
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 27 RKNLLAFPAQRTNDMASTQEEILPEG---WEARKSRSTGMTYYLNKHTKKSQWEKP 185
+K + +R N+ + ++E L + W KS + G TYY NK TK++QW P
Sbjct: 1337 QKEAIKAACRRANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.35
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 63 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 185
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.35
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 63 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 185
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.35
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 63 NDMASTQEEILPEG----WEARKSRSTGMTYYLNKHTKKSQWEKP 185
+D T E L + W+ S+S + YY+ + ++K+QWE P
Sbjct: 3035 SDFGPTSEHFLNQSVTLPWQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 31.1 bits (67), Expect = 0.46
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 93 LPEGWEARKSRSTGMTYYLNKHTKKSQWEKPGG 191
LP GWE ++ G T+Y++ +K+Q+E+P G
Sbjct: 332 LPPGWEQVDDQNYG-TFYVDHINRKTQYERPYG 363
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 132 GMTYYLNKHTKKSQWEKPGG 191
G YY N TKK+QW KP G
Sbjct: 137 GKPYYYNTLTKKTQWVKPDG 156
>AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical
protein Y92H12BM.1 protein.
Length = 157
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 105 WEARKSRSTGMTYYLNKHTKKSQWEKPGG 191
WE S+ TG YY N + ++W+KP G
Sbjct: 9 WELFDSK-TGRYYYYNASSSVTKWQKPTG 36
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 34 CGGNSNRFMRRAHCRNR 50
>AF067945-8|ABQ13060.1| 255|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform j protein.
Length = 255
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 55 CAGNANRFLRFLNCRRK 5
C GN+NRF+R +CR +
Sbjct: 79 CGGNSNRFMRRAHCRNR 95
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 5.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 141 YYLNKHTKKSQWEKPGGP 194
++ K K SQW +PGGP
Sbjct: 564 FFQQKFYKNSQWARPGGP 581
>Z77652-5|CAB01118.2| 646|Caenorhabditis elegans Hypothetical
protein C06B3.8 protein.
Length = 646
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 69 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 179
M + + E P G K R TY+L + KKS WE
Sbjct: 563 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 599
>AY652942-1|AAT73709.1| 684|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 684
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 69 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 179
M + + E P G K R TY+L + KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637
>AJ133597-1|CAC35530.1| 684|Caenorhabditis elegans soluble
guanylate cyclase protein.
Length = 684
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 69 MASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWE 179
M + + E P G K R TY+L + KKS WE
Sbjct: 601 METGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWE 637
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 54 QRTNDMASTQEEILPEGWEARKSRSTGMTYYLNKHTKKSQWEKPG 188
+RT+ + E L GW+ G+ YY ++ K++Q+E PG
Sbjct: 236 RRTHWVHPFVHESLKPGWKKFFDPEKGVFYY-HEEMKRTQYEHPG 279
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 132 GMTYYLNKHTKKSQWEKP 185
G YY N T+++ WEKP
Sbjct: 22 GRKYYFNSITQENTWEKP 39
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 132 GMTYYLNKHTKKSQWEKP 185
G YY N T+++ WEKP
Sbjct: 22 GRKYYFNSITQENTWEKP 39
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 132 GMTYYLNKHTKKSQWEKP 185
G YY N T+++ WEKP
Sbjct: 243 GRKYYFNSITQENTWEKP 260
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 132 GMTYYLNKHTKKSQWEKP 185
G YY N T+++ WEKP
Sbjct: 234 GRKYYFNSITQENTWEKP 251
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 261 HLLVKHSGSRRPSSWREEHITRTKEEA 341
+++++H G+R P W IT + EA
Sbjct: 636 NVIIRHDGARDPVGWENIQITVVRPEA 662
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,934,607
Number of Sequences: 27780
Number of extensions: 198594
Number of successful extensions: 581
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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