Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310G12f
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 357 e-100
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 206 2e-54
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 192 2e-50
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 147 8e-37
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 97 1e-21
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 96 3e-21
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 91 7e-20
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 60 2e-10
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 36 0.003
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.060
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.079
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.10
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.18
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 0.73
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 0.73
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 27 1.3
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 2.2
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 26 3.0
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 3.0
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 3.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 3.0
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 3.0
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 25 5.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 5.2
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 25 6.8
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 25 6.8
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 25 9.0
SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit... 25 9.0
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 357 bits (877), Expect = e-100
Identities = 163/173 (94%), Positives = 168/173 (97%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 13 GSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIE 72
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 360
HGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN PA
Sbjct: 73 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAF 132
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 519
YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDL
Sbjct: 133 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDL 185
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 206 bits (503), Expect = 2e-54
Identities = 92/174 (52%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE
Sbjct: 17 GSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIE 76
Query: 181 HGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 357
GI+ NW DME+IW + + ++ L PEEHP+LLTE PL N+EK+ + +ET N PA
Sbjct: 77 RGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPA 136
Query: 358 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 519
+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+
Sbjct: 137 LSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDV 190
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 192 bits (469), Expect = 2e-50
Identities = 89/174 (51%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 174
G+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++ R +L +KYP
Sbjct: 11 GTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYP 70
Query: 175 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 354
+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM + MFE +
Sbjct: 71 MENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFG 130
Query: 355 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 516
+YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+AGRD
Sbjct: 131 GVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRD 184
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 147 bits (357), Expect = 8e-37
Identities = 84/205 (40%), Positives = 115/205 (56%), Gaps = 32/205 (15%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK------------- 114
G+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 13 GTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSKRATED 71
Query: 115 -DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 288
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE
Sbjct: 72 LDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEP 131
Query: 289 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVS 444
PLNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+
Sbjct: 132 PLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVT 191
Query: 445 HTVPIYEGYALPHAILRLDLAGRDL 519
H +P+ EGY + +I + LAGRD+
Sbjct: 192 HIIPVAEGYVIGSSIKTMPLAGRDV 216
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 97.1 bits (231), Expect = 1e-21
Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-KYPI 177
GS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++ + P
Sbjct: 32 GSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPF 87
Query: 178 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 357
E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +N P+
Sbjct: 88 ERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPS 146
Query: 358 MYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 510
+ I + S Y + + ++GIVL+ G+ SH +P+ G + R+ G
Sbjct: 147 VAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGG 199
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 95.9 bits (228), Expect = 3e-21
Identities = 55/159 (34%), Positives = 82/159 (51%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 180
GS + GF+G+D P+ V PS G + G + Y+ +S G + +K I
Sbjct: 19 GSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIR 70
Query: 181 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 360
+G V NWD +W + +L+ P EHP+L+TE NP NR K + MFE+ PA
Sbjct: 71 NGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPAT 130
Query: 361 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 477
Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 131 YLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 91.5 bits (217), Expect = 7e-20
Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Frame = +1
Query: 1 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYP 174
GS + G+AG+++P + PS + GV + ++ YV DE Q I + +K
Sbjct: 18 GSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNG 71
Query: 175 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 354
+GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE + P
Sbjct: 72 KSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVP 131
Query: 355 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 510
A Y+ QAV +A+ ++T +++D G + P+ +G + I + LAG
Sbjct: 132 AFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAG 183
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 60.1 bits (139), Expect = 2e-10
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Frame = +1
Query: 172 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 339
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 340 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 513
P +A + ++ LYA G G+V+D G + PI +G + A +L L GR
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGR 229
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 36.3 bits (80), Expect = 0.003
Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Frame = +1
Query: 121 YVGDEAQSKRGILTLKYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEA 288
++G+E + TL++ H G + +W +W N + P ++ +LLT+
Sbjct: 43 FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQP 102
Query: 289 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG--------------IVLD 426
+ Q++FE F A A L + G T +V+D
Sbjct: 103 VFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVID 162
Query: 427 SGDGVSHTVPIYEGYALPHAILRLDLAGR 513
SG +H +P+ + A+ R+D+ G+
Sbjct: 163 SGYSFTHIIPVIDFSVQEQAVKRVDVGGK 191
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.060
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 232 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 375
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.079
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 356 PCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 490
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 29.9 bits (64), Expect = 0.24
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 347 TRPPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVATS 520
++P TSP+ P + P VP +S P P P PS P PS P+ TS
Sbjct: 997 SKPVSTSPAAPLARV--PPVPKLSSKAP----PVPLPSADAPPIPVPSTAPPVPIPTS 1048
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 353 PPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 490
PP +P P P VPP P+T P P PS P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 353 PPCTSPSKPCSHCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 490
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 3.9
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 353 PPCTSPSKPCSHCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPS 490
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.10
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 31 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 174
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.3 bits (65), Expect = 0.18
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 332 CSKHSTRPPCTSPSKPCSHCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPSCVWTWP 508
C+ ++ PP T S S P VPP S T + PT ST SP P+ +
Sbjct: 172 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCT 230
Query: 509 VATS 520
+TS
Sbjct: 231 TSTS 234
Score = 29.1 bits (62), Expect = 0.42
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 332 CSKHSTRPPCTSPSKPCSHCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPSCVWTWP 508
C+ ++ PP T S S P VPP S T + PT ST +P P+ +
Sbjct: 115 CTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCT 173
Query: 509 VATS 520
+TS
Sbjct: 174 TSTS 177
Score = 26.6 bits (56), Expect = 2.2
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 344 STRPPCTSPSKPCSHCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPSCVWTWPVATS 520
ST P T S S P VPP S T + PT ST SP P+ + +TS
Sbjct: 232 STSIP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTS 290
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 335 SKHSTRPPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVA 514
S ST PP S S + + + SC T ++ PT +T T + P+ T P+
Sbjct: 365 SSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSST-PLT 423
Query: 515 TS 520
T+
Sbjct: 424 TT 425
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 0.73
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 377 PCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 481
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.3 bits (60), Expect = 0.73
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 335 SKHSTRPPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 481
S+H + +PS +H P+ P ++ W P T PT P + + + P
Sbjct: 244 SQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 359 CTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVATS 520
C +PS+ C + PV + T S TP P+T + +PTP+ T A S
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTSTTTTAQS 875
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 359 CTSPSK-PCSHCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 484
C +PS+ CS + + P T AT + TP P+T T +PT
Sbjct: 914 CYNPSQYVCSDGS--LSPNTVTTTKATTTFTPTPTTTTTPTPT 954
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 353 PPCTSPSKPCSHCTRPVVPPVSCWTPATVSPTPCPS 460
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 398 PVVPPVSCWTPATVSP-TPCPSTRDTHSPTPSCVWTWPVATS 520
P P V + A SP TP P ++T +P+ S P ATS
Sbjct: 504 PSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAEPPSATS 545
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 274 LLTEAPLNPKANREKMTQIMFETFN 348
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 168 FEGQDTSFALCFVSYVRVLLSHADHHA 88
+EG+DT+ F +Y+R++L D A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 3.0
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 131 SPTYESFC--PMPTITP*WRGLPTIEGNTARGASSPAKPAL 15
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.2 bits (55), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 288 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALTVRVRSYHRYRAGLRRR 437
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3
Query: 507 GQVQTQDGVGECVSLVDGHGVGDTVAGVQHDTGGTTGR 394
GQ + G G G G GDTV GG GR
Sbjct: 122 GQNVQRGGRGGRYGSSGGRGAGDTVVSRSSGAGGARGR 159
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 5.2
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +2
Query: 371 SKPCSHCTRPVVPPVSCWT---PATVSPTPCPSTRDT-HSPTPSCVWTWPV 511
S+ S T P PP + T PA SP P P +T H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPP-PKVGETYHPPTASGTRVPPV 948
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 392 TRPVVPPVSCWTPATVSPTPCPSTRDT 472
T P S TPA V P P PST T
Sbjct: 833 TSPYATTSSHITPADVHPLPPPSTSTT 859
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 377 PCSHCTRPVVPPVSCWTPATVSPTPCPST 463
P S T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 91 VMVGMGQKDSYVGDEAQSKRGILTLKYPI 177
+M+G +Y+G AQ KR +LT + I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 24.6 bits (51), Expect = 9.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 427 SGDGVSHTVPIYEGYALP 480
+G G+ H + + +GYA+P
Sbjct: 157 AGRGIGHQIMVEQGYAMP 174
>SPAC29E6.02 |prp3|SPAC30.06|U4/U6 x U5 tri-snRNP complex subunit
Prp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +3
Query: 66 RRKAPPSGRDGRHGTEGLVRRRRSTEQKRYPDPQIPHRTRNRH 194
R + P+ ++ + E + RRR EQ+ Q+P R+ +
Sbjct: 14 RESSSPNSQNKPNAMEEIKRRRLQLEQRLAQQAQVPWEKRSEN 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,466,922
Number of Sequences: 5004
Number of extensions: 55849
Number of successful extensions: 235
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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