Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310G08f
         (521 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)    33   0.14 
SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0)                    29   3.1  

>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
          Length = 4160

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = -3

Query: 204  SNKTTKANELRLLKSQFKVYTHSSYMDVKENLRK 103
            S K   + ELR++KSQ + Y H SYMDV  NL++
Sbjct: 1649 SLKRKLSGELRVVKSQAEEY-HKSYMDVNRNLQE 1681


>SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0)
          Length = 1289

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -3

Query: 222 VLSSNYSNKTTKANELRLLKSQFKVYTHSSYMDVKENLRKVLFRTITL 79
           V++S++ +KTT +N L L+ +     T S        L+ +   T+T+
Sbjct: 552 VIASDFHSKTTSSNRLSLISNSSSTSTESDLSSGASELQSIHTPTVTV 599


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,145,127
Number of Sequences: 59808
Number of extensions: 210189
Number of successful extensions: 384
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)