Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310G07f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.94
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.94
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.94
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.2
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 23 1.6
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 3.8
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 22 3.8
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 3.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 3.8
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 3.8
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 3.8
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 3.8
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 3.8
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 22 3.8
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 3.8
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 5.0
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 8.7
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.94
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +1
Query: 19 VRMTISLTV---IIIETTGQISNALPIIIT 99
V + +SLTV ++ ET Q+S+A+P++ T
Sbjct: 247 VTILLSLTVFLNLVAETLPQVSDAIPLLGT 276
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.94
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +1
Query: 19 VRMTISLTV---IIIETTGQISNALPIIIT 99
V + +SLTV ++ ET Q+S+A+P++ T
Sbjct: 247 VTILLSLTVFLNLVAETLPQVSDAIPLLGT 276
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.94
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +1
Query: 19 VRMTISLTV---IIIETTGQISNALPIIIT 99
V + +SLTV ++ ET Q+S+A+P++ T
Sbjct: 247 VTILLSLTVFLNLVAETLPQVSDAIPLLGT 276
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.4 bits (48), Expect = 1.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 348 FRSNHIQTSSWTDTALPVDSAVAE*NIQ*KREHD 449
F N I+T SW P+D A I+ R+ D
Sbjct: 351 FEGNPIKTISWLKDGHPIDHNEAVLRIESVRKED 384
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 23.0 bits (47), Expect = 1.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 155 TSSWRACRCCRGSRLRWRT 211
T + C CCR S LR RT
Sbjct: 75 TGFLKECYCCRESFLRERT 93
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.8 bits (44), Expect = 3.8
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -3
Query: 354 FGIISEGRVNDREPVVGNQLKYLDDV 277
FG++ + R+P+ Y+DD+
Sbjct: 384 FGVMGDSATAMRDPIFYRWHSYIDDI 409
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 21.8 bits (44), Expect = 3.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -3
Query: 354 FGIISEGRVNDREPVVGNQLKYLDDV 277
FG++++ V+ R+P+ Y+DD+
Sbjct: 384 FGVMADPAVDLRDPLFFRWHAYIDDM 409
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 3.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 427 YNENANTTWSNFQVDMDMFRKEYPRFP 507
YN NAN+T+ +YP+ P
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHP 56
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 5.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -2
Query: 478 CPCPPGNSTTSC 443
C CP G + T+C
Sbjct: 401 CDCPSGTNGTNC 412
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 493 IPS*TCPCPPGNSTTSC 443
+ S TC CP G S +C
Sbjct: 4 VDSYTCTCPLGFSGINC 20
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 20.6 bits (41), Expect = 8.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 435 FIVYFILQQHYQLGAQYQSTKTFV 364
FIVYF++ ++ Q T T+V
Sbjct: 155 FIVYFLIYAVLEMLLQKYKTVTYV 178
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,501
Number of Sequences: 336
Number of extensions: 2998
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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