Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310G07f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2561| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_28219| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_50267| Best HMM Match : Voltage_CLC (HMM E-Value=6.9e-31) 68 4e-12
SB_25467| Best HMM Match : Voltage_CLC (HMM E-Value=2.4e-10) 56 2e-08
SB_18582| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_18313| Best HMM Match : Trans_reg_C (HMM E-Value=0.91) 33 0.14
SB_21412| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_15616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_6495| Best HMM Match : RVT_1 (HMM E-Value=1.2e-17) 31 0.76
SB_21914| Best HMM Match : Exo_endo_phos (HMM E-Value=6e-05) 31 0.76
SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0) 30 1.0
SB_25963| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7) 28 4.1
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36) 28 5.4
SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0) 28 5.4
SB_56707| Best HMM Match : DUF1361 (HMM E-Value=4.5) 27 7.1
SB_52025| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_5207| Best HMM Match : TUDOR (HMM E-Value=3.1) 27 9.4
SB_58240| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_5031| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_2561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 116 bits (279), Expect = 1e-26
Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Frame = +1
Query: 7 LGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLP 186
LGGVVRMTISLTVI+IE+T +IS LPI+ITL+VAKW GD FNEG+YDI+I+L +PLL
Sbjct: 78 LGGVVRMTISLTVILIESTNEISYGLPIMITLMVAKWSGDLFNEGLYDIHIKLKSIPLLE 137
Query: 187 WEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPV--VDPPLADDSEVT 360
W P + + A +M + + + I+ ILK ++N FPV VD A +V+
Sbjct: 138 WSAPSEMYRLKAWNIMESCLSYIYPHTRLHSIIGILKTTAHNAFPVVTVDKASAIPGDVS 197
Query: 361 TY 366
Y
Sbjct: 198 DY 199
>SB_28219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNE 138
A LGGVVRMT+SLTVI++E T I+ LP+++ L++AKW+GDFFNE
Sbjct: 34 ASLGGVVRMTLSLTVILMEATSNITYGLPMMLVLMIAKWVGDFFNE 79
>SB_50267| Best HMM Match : Voltage_CLC (HMM E-Value=6.9e-31)
Length = 347
Score = 68.1 bits (159), Expect = 4e-12
Identities = 28/44 (63%), Positives = 38/44 (86%)
Frame = +1
Query: 7 LGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNE 138
LGGVVRMT+SLTVI++E T I+ LP+++ L++AKW+GDFFNE
Sbjct: 217 LGGVVRMTLSLTVILMEATSNITYGLPMMLVLMIAKWVGDFFNE 260
>SB_25467| Best HMM Match : Voltage_CLC (HMM E-Value=2.4e-10)
Length = 300
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A + G V TIS +VI+ E TGQI++ LP++I +++A I + YD IQ+ +P
Sbjct: 233 AAMSGAVTHTISTSVIVFELTGQIAHILPVMIAVLIANAIAQWLQPSFYDSIIQIKSLPY 292
Query: 181 LP 186
LP
Sbjct: 293 LP 294
>SB_18582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 46 IIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWEP 195
I++E T I LPI++ ++VAKW+GDF +Y ++L +P L EP
Sbjct: 183 IMMEITNDIQFLLPIMVGIMVAKWVGDFTTHPLYHALLELKCIPFLDSEP 232
>SB_18313| Best HMM Match : Trans_reg_C (HMM E-Value=0.91)
Length = 567
Score = 33.1 bits (72), Expect = 0.14
Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
+ + V + + ++ T LP +T +V + D F Y+ Y L G+
Sbjct: 265 SSIASVDNLCKKINEFFVQLTSDFRPLLPHDVTAIVVPDVPDHFLVSSYETYKSLRGILT 324
Query: 181 L----PWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADD 348
P P L ++A E+ T GH+ +LK + + P + PP + +
Sbjct: 325 NKAPGPDGIPALILKMFAFELSPIVAELYNTSLKEGHLPGLLKSANVHPLPKLSPPKSIE 384
Query: 349 SEV 357
+++
Sbjct: 385 TDI 387
>SB_21412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1015
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 4/123 (3%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
+ + V + + ++ T LP +T +V + D F Y+ Y L G+
Sbjct: 389 SSIASVDNLCKKINEFFVQLTSDFRPLLPHDVTAIVVPDVPDHFLVSSYEAYKSLRGILA 448
Query: 181 L----PWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADD 348
P P L ++ E+ T GH+ +LK + P + PP + +
Sbjct: 449 NKAPGPDGIPALIFKMFTFELSPIVAELYNTSLKEGHLPGLLKSANVRPMPKLSPPKSIE 508
Query: 349 SEV 357
+++
Sbjct: 509 TDI 511
>SB_15616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 30.7 bits (66), Expect = 0.76
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = +1
Query: 52 IETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL--LPWEP--PPLAHNVY 219
++ T LP +T +V + D F Y+ Y L G+ P + P L ++
Sbjct: 56 VQLTSDFRPLLPHDVTAIVVPDVPDHFLVSSYEAYKSLRGILTNKAPGQDGIPALILKMF 115
Query: 220 ASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPP 336
A E+ T GH+ +LK + P + PP
Sbjct: 116 AFELSPIVAELYNTSLKEGHLPGLLKSANVRPLPKLSPP 154
>SB_6495| Best HMM Match : RVT_1 (HMM E-Value=1.2e-17)
Length = 554
Score = 30.7 bits (66), Expect = 0.76
Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
+ + V + + ++ T LP +T +V + D F ++ Y L G+
Sbjct: 14 SSIASVDNLCKKINEFFVQLTSDFRPLLPHDVTAIVVPDVPDHFLVSSHEAYKSLRGILT 73
Query: 181 L----PWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADD 348
P P L ++A E+ T GH+ +LK + P + PP + +
Sbjct: 74 NKAPGPDGIPALILKMFAFELSPIVAELYNTSLKEGHLPGLLKSANVRPLPKLSPPKSIE 133
Query: 349 SEV 357
+++
Sbjct: 134 TDI 136
>SB_21914| Best HMM Match : Exo_endo_phos (HMM E-Value=6e-05)
Length = 502
Score = 30.7 bits (66), Expect = 0.76
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = +1
Query: 52 IETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL--LPWEP--PPLAHNVY 219
++ T LP +T +V + D F Y+ Y L G+ P + P L ++
Sbjct: 299 VQLTSDFRPLLPHDVTAIVVPDVPDHFLVSSYEAYKSLRGILTNKAPGQDGIPALILKMF 358
Query: 220 ASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPP 336
A E+ T GH+ +LK + P + PP
Sbjct: 359 AFELSPIVAELYNTSLKEGHLPGLLKSANVRPLPKLSPP 397
>SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1101
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 478 CPCPPGNSTTSCSRFHCIFYSAT 410
CPC PG T +CSR + FY T
Sbjct: 797 CPCKPGVITRTCSRCNDSFYGYT 819
>SB_25963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 10 GGVVRMTISLTVIIIETTGQISNALPIIITLVV 108
G ++ +TI +T+III T I ++ IIIT+++
Sbjct: 110 GTIIVITIIITIIIITNTITIIISITIIITIII 142
>SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7)
Length = 305
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 235 SHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSEVTTYKR 372
+HP +T T + GH+VE L + G P ++ +D EV KR
Sbjct: 220 AHPNYTFSTFSSGGHVVEDLDVEVLAGTPFME---KNDVEVRPVKR 262
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = -1
Query: 161 WMYIS*IPSLKKSPIHLATTSVIMMGRAFDICPVVSIIMTVNDIV 27
W Y + L+++ + A V++ F+ PVV+ + T++ +V
Sbjct: 340 WKYSEEVRHLRRTEMKYARNKVLIQSSLFENIPVVAALATLSSVV 384
>SB_45459| Best HMM Match : RVT_1 (HMM E-Value=6e-36)
Length = 1346
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 28 TISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWEPPPL 204
TI L ++ TT + L + LV+ F + Y +Y+QL G+ LPW PL
Sbjct: 147 TIELWYFLVLTTAFPGSLLKKLNLLVLNLLAA--FTDMSYRLYLQLYGIYKLPWMSFPL 203
>SB_5403| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 684
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 158 SSWRACR--CCRGSRLRWRTTCTRPK 229
SSW +C C G+R R RT CT PK
Sbjct: 419 SSWSSCTKSCSGGTRTRTRT-CTNPK 443
>SB_56707| Best HMM Match : DUF1361 (HMM E-Value=4.5)
Length = 142
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = -1
Query: 458 FDHVVFAFSLYILFCNSTINWERSISPRRRLYVVTSESSARG 333
F+ ++ +FS + L C + ++ P+R + ++ S S G
Sbjct: 91 FERIILSFSFFFLLCVAERSYRERRGPQRSVDMIVSSSFVLG 132
>SB_52025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +1
Query: 163 LAGVPLLPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY 309
LA +P L + L + Y ++SH ++ L + N+ +++ +L +SY
Sbjct: 49 LAVLPYLSYLSAMLPNLSYLLAILSHLLYLLAVLPNLSYLLAVLPNLSY 97
>SB_5207| Best HMM Match : TUDOR (HMM E-Value=3.1)
Length = 364
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 172 VPLLPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEI 291
V LLP + VYA ++ F L TVE VGH +EI
Sbjct: 142 VRLLPMRADEVGARVYAR--WTNGQFYLGTVERVGHKIEI 179
>SB_58240| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 379 HEDVCMWLLRNHQRGAGQRPGTRCRKPA*VSRRCDQRSRPFAT*TPDATLL 227
H +C+ L R+ + G K RCD+RSR + TP+ T++
Sbjct: 52 HSAICLSLGRDPAKKRGPGFNNALLKDESFVERCDKRSRFLSKNTPNFTMI 102
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +1
Query: 16 VVRMTISLTVIIIET-TGQISNALPIIITLVVAKWIGDFF---NEGIYDIY 156
+V +T+++ VIII T T I + +I+T+ V +G FF N+ ++ Y
Sbjct: 687 IVTVTVTIIVIIIVTVTVTIIVIVIVIVTVTVQPTVGVFFKTLNDSLFTRY 737
>SB_5031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 172 VPLLPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEI 291
V LLP + VYA ++ F L TVE VGH +EI
Sbjct: 303 VRLLPMRADEVGARVYAR--WTNGQFYLGTVERVGHKIEI 340
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,209,268
Number of Sequences: 59808
Number of extensions: 384840
Number of successful extensions: 1202
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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