Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310G07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical pr... 154 3e-38
AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated... 154 3e-38
AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type chlo... 154 3e-38
Z68334-2|CAA92728.2| 797|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z54216-10|CAA90949.2| 797|Caenorhabditis elegans Hypothetical p... 64 6e-11
AF173174-1|AAF13167.1| 796|Caenorhabditis elegans CLC chloride ... 64 6e-11
AB035090-1|BAA86959.1| 797|Caenorhabditis elegans clc chloride ... 64 6e-11
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 63 1e-10
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 63 1e-10
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 63 1e-10
AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride ... 63 1e-10
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 60 7e-10
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 60 7e-10
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 60 7e-10
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 60 7e-10
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 59 2e-09
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 59 2e-09
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 59 2e-09
Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical pr... 58 4e-09
D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein. 58 4e-09
AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride ... 56 1e-08
Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical pr... 28 4.7
AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein. 28 4.7
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 28 4.7
AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP ... 28 4.7
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.1
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 27 8.1
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 27 8.1
>Z75955-1|CAB00111.2| 796|Caenorhabditis elegans Hypothetical
protein R07B7.1 protein.
Length = 796
Score = 154 bits (374), Expect = 3e-38
Identities = 78/146 (53%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
AQLGGVVRMTISLT II+E T I+ LPI++ L+V KW+GD FNEG+YD +I LA VP+
Sbjct: 538 AQLGGVVRMTISLTAIIMEATKDITFGLPIMLVLMVTKWVGDMFNEGLYDAHIDLAEVPI 597
Query: 181 LPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSE-V 357
L W PP ++ N+ A VM V L E V IVEIL+ ++GFPVVD E +
Sbjct: 598 LGWNPPKMSRNILADRVMRKDVVALERRERVSRIVEILRSTLHHGFPVVDRIEESPYESL 657
Query: 358 TTYKRLRGLILRSQLIVLLQNKIYNE 435
Y RL+G ILRSQL LL+N+I+ E
Sbjct: 658 PDYGRLKGYILRSQLFKLLENRIFEE 683
>AF328908-1|AAK01123.1| 796|Caenorhabditis elegans voltage-gated
chloride channelCLH-6 protein.
Length = 796
Score = 154 bits (374), Expect = 3e-38
Identities = 78/146 (53%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
AQLGGVVRMTISLT II+E T I+ LPI++ L+V KW+GD FNEG+YD +I LA VP+
Sbjct: 538 AQLGGVVRMTISLTAIIMEATKDITFGLPIMLVLMVTKWVGDMFNEGLYDAHIDLAEVPI 597
Query: 181 LPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSE-V 357
L W PP ++ N+ A VM V L E V IVEIL+ ++GFPVVD E +
Sbjct: 598 LGWNPPKMSRNILADRVMRKDVVALERRERVSRIVEILRSTLHHGFPVVDRIEESPYESL 657
Query: 358 TTYKRLRGLILRSQLIVLLQNKIYNE 435
Y RL+G ILRSQL LL+N+I+ E
Sbjct: 658 PDYGRLKGYILRSQLFKLLENRIFEE 683
>AF319616-1|AAG49526.1| 796|Caenorhabditis elegans CLC-type
chloride channel CLH-6 protein.
Length = 796
Score = 154 bits (374), Expect = 3e-38
Identities = 78/146 (53%), Positives = 98/146 (67%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
AQLGGVVRMTISLT II+E T I+ LPI++ L+V KW+GD FNEG+YD +I LA VP+
Sbjct: 538 AQLGGVVRMTISLTAIIMEATKDITFGLPIMLVLMVTKWVGDMFNEGLYDAHIDLAEVPI 597
Query: 181 LPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSE-V 357
L W PP ++ N+ A VM V L E V IVEIL+ ++GFPVVD E +
Sbjct: 598 LGWNPPKMSRNILADRVMRKDVVALERRERVSRIVEILRSTLHHGFPVVDRIEESPYESL 657
Query: 358 TTYKRLRGLILRSQLIVLLQNKIYNE 435
Y RL+G ILRSQL LL+N+I+ E
Sbjct: 658 PDYGRLKGYILRSQLFKLLENRIFEE 683
>Z68334-2|CAA92728.2| 797|Caenorhabditis elegans Hypothetical
protein C07H4.2 protein.
Length = 797
Score = 64.1 bits (149), Expect = 6e-11
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 22/131 (16%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNE-GIYDIYIQLAGVP 177
A LGGV RMT+SL VI+ E TG + +P ++ + +KWIGD ++ GIY+ +I+L G P
Sbjct: 553 AVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSKWIGDGISKMGIYEAHIELNGYP 612
Query: 178 LLPWEPPPLAHNVYASEVMSHPVF----------TLRTVEN-----------VGHIVEIL 294
L ++ AS+VM + LR ++N +G + +L
Sbjct: 613 FLD-SKGEYPYSTVASQVMRPSIHRQVADEMSMSDLRELKNELSVITESGMTLGDLESLL 671
Query: 295 KLVSYNGFPVV 327
+ +NGFPVV
Sbjct: 672 RQTDFNGFPVV 682
>Z54216-10|CAA90949.2| 797|Caenorhabditis elegans Hypothetical
protein C07H4.2 protein.
Length = 797
Score = 64.1 bits (149), Expect = 6e-11
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 22/131 (16%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNE-GIYDIYIQLAGVP 177
A LGGV RMT+SL VI+ E TG + +P ++ + +KWIGD ++ GIY+ +I+L G P
Sbjct: 553 AVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSKWIGDGISKMGIYEAHIELNGYP 612
Query: 178 LLPWEPPPLAHNVYASEVMSHPVF----------TLRTVEN-----------VGHIVEIL 294
L ++ AS+VM + LR ++N +G + +L
Sbjct: 613 FLD-SKGEYPYSTVASQVMRPSIHRQVADEMSMSDLRELKNELSVITESGMTLGDLESLL 671
Query: 295 KLVSYNGFPVV 327
+ +NGFPVV
Sbjct: 672 RQTDFNGFPVV 682
>AF173174-1|AAF13167.1| 796|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 796
Score = 64.1 bits (149), Expect = 6e-11
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 22/131 (16%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNE-GIYDIYIQLAGVP 177
A LGGV RMT+SL VI+ E TG + +P ++ + +KWIGD ++ GIY+ +I+L G P
Sbjct: 553 AVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSKWIGDGISKMGIYEAHIELNGYP 612
Query: 178 LLPWEPPPLAHNVYASEVMSHPVF----------TLRTVEN-----------VGHIVEIL 294
L ++ AS+VM + LR ++N +G + +L
Sbjct: 613 FLD-SKGEYPYSTVASQVMRPSIHRQVADEMSMSDLRELKNELSVITESGMTLGDLESLL 671
Query: 295 KLVSYNGFPVV 327
+ +NGFPVV
Sbjct: 672 RQTDFNGFPVV 682
>AB035090-1|BAA86959.1| 797|Caenorhabditis elegans clc chloride
channel homologue protein.
Length = 797
Score = 64.1 bits (149), Expect = 6e-11
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 22/131 (16%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNE-GIYDIYIQLAGVP 177
A LGGV RMT+SL VI+ E TG + +P ++ + +KWIGD ++ GIY+ +I+L G P
Sbjct: 553 AVLGGVTRMTVSLVVIMFELTGSLEFIVPTMVATMFSKWIGDGISKMGIYEAHIELNGYP 612
Query: 178 LLPWEPPPLAHNVYASEVMSHPVF----------TLRTVEN-----------VGHIVEIL 294
L ++ AS+VM + LR ++N +G + +L
Sbjct: 613 FLD-SKGEYPYSTVASQVMRPSIHRQVADEMSMSDLRELKNELSVITESGMTLGDLESLL 671
Query: 295 KLVSYNGFPVV 327
+ +NGFPVV
Sbjct: 672 RQTDFNGFPVV 682
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 62.9 bits (146), Expect = 1e-10
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A V T+S++V+I E TGQ+ LP++I+++++ + + +D I++ +P
Sbjct: 556 AAFSASVTHTVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQPSFFDTIIKIKHLPF 615
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSE 354
LP PP L H YA +M PV + + I E ++ FPVVD + +S+
Sbjct: 616 LPDIPPSNNLVHTTYAEHIMVTPVKFITKITTYNEIREAVQ-TGLRLFPVVD---SKNSQ 671
Query: 355 VTTYKRLRGLILRSQLIVLLQNKI 426
+ L G + R L VLL KI
Sbjct: 672 M-----LIGTVSRRYLTVLLNGKI 690
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 62.9 bits (146), Expect = 1e-10
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A V T+S++V+I E TGQ+ LP++I+++++ + + +D I++ +P
Sbjct: 556 AAFSASVTHTVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQPSFFDTIIKIKHLPF 615
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSE 354
LP PP L H YA +M PV + + I E ++ FPVVD + +S+
Sbjct: 616 LPDIPPSNNLVHTTYAEHIMVTPVKFITKITTYNEIREAVQ-TGLRLFPVVD---SKNSQ 671
Query: 355 VTTYKRLRGLILRSQLIVLLQNKI 426
+ L G + R L VLL KI
Sbjct: 672 M-----LIGTVSRRYLTVLLNGKI 690
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 62.9 bits (146), Expect = 1e-10
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A V T+S++V+I E TGQ+ LP++I+++++ + + +D I++ +P
Sbjct: 556 AAFSASVTHTVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQPSFFDTIIKIKHLPF 615
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSE 354
LP PP L H YA +M PV + + I E ++ FPVVD + +S+
Sbjct: 616 LPDIPPSNNLVHTTYAEHIMVTPVKFITKITTYNEIREAVQ-TGLRLFPVVD---SKNSQ 671
Query: 355 VTTYKRLRGLILRSQLIVLLQNKI 426
+ L G + R L VLL KI
Sbjct: 672 M-----LIGTVSRRYLTVLLNGKI 690
>AF173173-1|AAF13166.1| 978|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 978
Score = 62.9 bits (146), Expect = 1e-10
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A V T+S++V+I E TGQ+ LP++I+++++ + + +D I++ +P
Sbjct: 484 AAFSASVTHTVSVSVMIFEITGQLHFILPVMISVMLSNAVCAYLQPSFFDTIIKIKHLPF 543
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSYNGFPVVDPPLADDSE 354
LP PP L H YA +M PV + + I E ++ FPVVD + +S+
Sbjct: 544 LPDIPPSNNLVHTTYAEHIMVTPVKFITKITTYNEIREAVQ-TGLRLFPVVD---SKNSQ 599
Query: 355 VTTYKRLRGLILRSQLIVLLQNKI 426
+ L G + R L VLL KI
Sbjct: 600 M-----LIGTVSRRYLTVLLNGKI 618
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 60.5 bits (140), Expect = 7e-10
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S+ VI+ E TGQ+ + LP++I +++A + + IYD I++ +P LP
Sbjct: 556 GAVTHTVSVAVIVFELTGQLCHLLPVMIAVLIANAVASYLQPSIYDSIIRIKNLPYLPDI 615
Query: 193 P--PPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKL-VSYNGFPVVD 330
P L H + + M P+ + VG I L+ FP+V+
Sbjct: 616 PHTTSLYHQMLIEQFMISPLVYIAKDSTVGDIKRALETKTRIRAFPLVE 664
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 60.5 bits (140), Expect = 7e-10
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S+ VI+ E TGQ+ + LP++I +++A + + IYD I++ +P LP
Sbjct: 485 GAVTHTVSVAVIVFELTGQLCHLLPVMIAVLIANAVASYLQPSIYDSIIRIKNLPYLPDI 544
Query: 193 P--PPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKL-VSYNGFPVVD 330
P L H + + M P+ + VG I L+ FP+V+
Sbjct: 545 PHTTSLYHQMLIEQFMISPLVYIAKDSTVGDIKRALETKTRIRAFPLVE 593
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 60.5 bits (140), Expect = 7e-10
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S+ VI+ E TGQ+ + LP++I +++A + + IYD I++ +P LP
Sbjct: 485 GAVTHTVSVAVIVFELTGQLCHLLPVMIAVLIANAVASYLQPSIYDSIIRIKNLPYLPDI 544
Query: 193 P--PPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKL-VSYNGFPVVD 330
P L H + + M P+ + VG I L+ FP+V+
Sbjct: 545 PHTTSLYHQMLIEQFMISPLVYIAKDSTVGDIKRALETKTRIRAFPLVE 593
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 60.5 bits (140), Expect = 7e-10
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S+ VI+ E TGQ+ + LP++I +++A + + IYD I++ +P LP
Sbjct: 556 GAVTHTVSVAVIVFELTGQLCHLLPVMIAVLIANAVASYLQPSIYDSIIRIKNLPYLPDI 615
Query: 193 P--PPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKL-VSYNGFPVVD 330
P L H + + M P+ + VG I L+ FP+V+
Sbjct: 616 PHTTSLYHQMLIEQFMISPLVYIAKDSTVGDIKRALETKTRIRAFPLVE 664
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 475 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 534
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 535 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 594
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 595 AKRYLTMLLRRHVLVNQQD 613
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 506 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 565
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 566 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 625
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 626 AKRYLTMLLRRHVLVNQQD 644
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 511 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 570
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 571 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 630
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 631 AKRYLTMLLRRHVLVNQQD 649
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 475 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 534
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 535 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 594
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 595 AKRYLTMLLRRHVLVNQQD 613
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 506 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 565
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 566 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 625
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 626 AKRYLTMLLRRHVLVNQQD 644
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 511 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 570
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 571 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 630
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 631 AKRYLTMLLRRHVLVNQQD 649
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 511 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 570
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 571 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 630
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 631 AKRYLTMLLRRHVLVNQQD 649
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 58.8 bits (136), Expect = 2e-09
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 GVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWE 192
G V T+S++VII E TGQ+S LP++I +++ + F IY+ I++ P LP
Sbjct: 475 GAVTHTLSVSVIICELTGQLSPILPVLIAMLMGNAVCKFLQPSIYESIIRVKKYPYLPDL 534
Query: 193 PPP--LAHNVYASEVMSHPVFTLRTVENVGHIVEILKLVSY-NGFPVVDPPLADDSEVTT 363
PP H V ++M V + + EIL+L + FP+V +
Sbjct: 535 PPSRVSVHTVKVEQLMVTDVIYITKDMTYREMKEILQLAPHLRSFPIVTDHENKILLGSV 594
Query: 364 YKRLRGLILRSQLIVLLQN 420
KR ++LR ++V Q+
Sbjct: 595 AKRYLTMLLRRHVLVNQQD 613
>Z70037-3|CAC42352.1| 902|Caenorhabditis elegans Hypothetical
protein T27D12.2b protein.
Length = 902
Score = 58.0 bits (134), Expect = 4e-09
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A G V ++S+ +I+ ETTGQ+ LP++I L+++ I F IYD I++ G P
Sbjct: 545 ASFTGSVTHSLSIALIVCETTGQLCALLPVLIALMISNAICAFLQPSIYDSIIKINGYPY 604
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVE-ILKLVSYNGFPVVDPPLADDS 351
L PP H + +M +F + + E +L+ + +P V D
Sbjct: 605 LADLPPSRMSVHQMKVERIMVKDIFYITRETTYRELREMLLESPTLRSYPFV----TDSR 660
Query: 352 EVTTYKRLRGLILRSQLIVLLQNKI 426
+T L G + R L+ L+Q K+
Sbjct: 661 SMT----LLGSVARKYLLYLIQRKL 681
>Z70037-2|CAA93879.2| 906|Caenorhabditis elegans Hypothetical
protein T27D12.2a protein.
Length = 906
Score = 58.0 bits (134), Expect = 4e-09
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A G V ++S+ +I+ ETTGQ+ LP++I L+++ I F IYD I++ G P
Sbjct: 545 ASFTGSVTHSLSIALIVCETTGQLCALLPVLIALMISNAICAFLQPSIYDSIIKINGYPY 604
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVE-ILKLVSYNGFPVVDPPLADDS 351
L PP H + +M +F + + E +L+ + +P V D
Sbjct: 605 LADLPPSRMSVHQMKVERIMVKDIFYITRETTYRELREMLLESPTLRSYPFV----TDSR 660
Query: 352 EVTTYKRLRGLILRSQLIVLLQNKI 426
+T L G + R L+ L+Q K+
Sbjct: 661 SMT----LLGSVARKYLLYLIQRKL 681
>D84668-1|BAA86913.1| 902|Caenorhabditis elegans CLH-1 protein.
Length = 902
Score = 58.0 bits (134), Expect = 4e-09
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A G V ++S+ +I+ ETTGQ+ LP++I L+++ I F IYD I++ G P
Sbjct: 545 ASFTGSVTHSLSIALIVCETTGQLCALLPVLIALMISNAICAFLQPSIYDSIIKINGYPY 604
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVE-ILKLVSYNGFPVVDPPLADDS 351
L PP H + +M +F + + E +L+ + +P V D
Sbjct: 605 LADLPPSRMSVHQMKVERIMVKDIFYITRETTYRELREMLLESPTLRSYPFV----TDSR 660
Query: 352 EVTTYKRLRGLILRSQLIVLLQNKI 426
+T L G + R L+ L+Q K+
Sbjct: 661 SMT----LLGSVARKYLLYLIQRKL 681
>AF173170-1|AAF13163.1| 868|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 868
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Frame = +1
Query: 1 AQLGGVVRMTISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPL 180
A G V ++S+ +++ ETTGQ+ LP++I L+++ I F IYD I++ G P
Sbjct: 507 ASFTGSVTHSLSIALMLCETTGQLCALLPVLIALMISNAICAFLQPSIYDSIIKINGYPY 566
Query: 181 LPWEPPP--LAHNVYASEVMSHPVFTLRTVENVGHIVE-ILKLVSYNGFPVVDPPLADDS 351
L PP H + +M +F + + E +L+ + +P V D
Sbjct: 567 LADLPPSRMSVHQMKVERIMVKDIFYITRETTYRELREMLLESPTLRSYPFV----TDSR 622
Query: 352 EVTTYKRLRGLILRSQLIVLLQNKI 426
+T L G + R L+ L+Q K+
Sbjct: 623 SMT----LLGSVARKYLLYLIQRKL 643
>Z70681-3|CAA94579.2| 403|Caenorhabditis elegans Hypothetical
protein C30F2.3 protein.
Length = 403
Score = 31.1 bits (67), Expect = 0.50
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 365 YVVTSESSARGGSTTGNPL*E---TSLSISTM*PTFSTVRNVNTGCDITSDAYTL 210
Y+ A GS++ NP+ +++ STM PT S N+ TG T YTL
Sbjct: 167 YIYPFGQFAPAGSSSSNPVLRDQNSNIYTSTMSPTSSGTNNIGTGNAYTGRTYTL 221
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -1
Query: 356 TSESSARGGSTTGNPL*ETSLSIST---M*PTFSTVRNVNTGCDITSDAYTLCANGGGSH 186
T ESS+ G + T P E S +I+T T S+V+ T D S + T+ + S
Sbjct: 308 TRESSSTGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKTRTSEDKPSSSTTVPTSASTSE 367
Query: 185 GNSGTP 168
++ +P
Sbjct: 368 SSTSSP 373
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 121 GDFFNEGIYDIYIQLAGVPLLPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKL 300
G + I D AGV L+ PPP H++Y+ E ++ ++ L+ V + +KL
Sbjct: 1037 GHKVTQDIADTRKSTAGVGLI--SPPP-HHDIYSIEDLAQLIYDLKCANPVARV--SVKL 1091
Query: 301 VSYNGFPVV 327
VS G +V
Sbjct: 1092 VSEAGVGIV 1100
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 121 GDFFNEGIYDIYIQLAGVPLLPWEPPPLAHNVYASEVMSHPVFTLRTVENVGHIVEILKL 300
G + I D AGV L+ PPP H++Y+ E ++ ++ L+ V + +KL
Sbjct: 1037 GHKVTQDIADTRKSTAGVGLI--SPPP-HHDIYSIEDLAQLIYDLKCANPVARV--SVKL 1091
Query: 301 VSYNGFPVV 327
VS G +V
Sbjct: 1092 VSEAGVGIV 1100
>Z68333-3|CAA92726.2| 1694|Caenorhabditis elegans Hypothetical protein
C05C12.3 protein.
Length = 1694
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 31 ISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWEPPP 201
+ LTV ++ T + N + T + K I +++ Y Q+ PW PPP
Sbjct: 1309 VGLTVFMLATNVLLMNVMVAGCTYIFEKHIQSTREIFLFERYGQVMEYESTPWLPPP 1365
>AY726541-1|AAU25950.1| 1694|Caenorhabditis elegans GTL-1 protein.
Length = 1694
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 31 ISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWEPPP 201
+ LTV ++ T + N + T + K I +++ Y Q+ PW PPP
Sbjct: 1309 VGLTVFMLATNVLLMNVMVAGCTYIFEKHIQSTREIFLFERYGQVMEYESTPWLPPP 1365
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 160 QLAGVPLLPWEPPPLAHNVYASEVMSHPVFT 252
++ G P +PW PP L + ASE+ S VF+
Sbjct: 488 RILGDPTVPWTPPQLGGS-EASELQSSKVFS 517
>AJ276019-1|CAC81667.1| 1681|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1681
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 31 ISLTVIIIETTGQISNALPIIITLVVAKWIGDFFNEGIYDIYIQLAGVPLLPWEPPP 201
+ LTV ++ T + N + T + K I +++ Y Q+ PW PPP
Sbjct: 1296 VGLTVFMLATNVLLMNVMVAGCTYIFEKHIQSTREIFLFERYGQVMEYESTPWLPPP 1352
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = -1
Query: 359 VTSESSARGGSTTGNPL*ETSLSISTM*PTFSTVRNVNTGCDITSDAYTLCANGGGSHGN 180
+ S ++A GS+T P +++T + ST N NTG + T ++ GG+ G+
Sbjct: 1577 IPSSTAANTGSSTSGP------TVATTQGSSSTQTNSNTGSTTVATTVTQGSSTGGNSGS 1630
Query: 179 S 177
+
Sbjct: 1631 T 1631
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 424 FYSATALSTGSAVSVHEDVCMWLLRNHQRGAGQRPGTRCRK 302
FY ++ S S + C W L +++ AG+ +CRK
Sbjct: 648 FYDCNRYTSCSTCSASQFPCDWCLESNECVAGKLTEDKCRK 688
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 424 FYSATALSTGSAVSVHEDVCMWLLRNHQRGAGQRPGTRCRK 302
FY ++ S S + C W L +++ AG+ +CRK
Sbjct: 654 FYDCNRYTSCSTCSASQFPCDWCLESNECVAGKLTEDKCRK 694
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,136,849
Number of Sequences: 27780
Number of extensions: 274943
Number of successful extensions: 978
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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