Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310G06f
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M73031-1|AAA58630.1| 108|Homo sapiens coupling factor 6 protein. 56 4e-08
M37104-1|AAA51807.1| 108|Homo sapiens ATPase coupling factor 6 ... 56 4e-08
CR456950-1|CAG33231.1| 108|Homo sapiens ATP5J protein. 56 4e-08
BT007244-1|AAP35908.1| 108|Homo sapiens ATP synthase, H+ transp... 56 4e-08
BC001178-1|AAH01178.1| 108|Homo sapiens ATP synthase, H+ transp... 56 4e-08
AY544129-1|AAT11160.1| 108|Homo sapiens proliferation-inducing ... 56 4e-08
BC066310-1|AAH66310.1| 108|Homo sapiens ATP synthase, H+ transp... 53 4e-07
>M73031-1|AAA58630.1| 108|Homo sapiens coupling factor 6 protein.
Length = 108
Score = 56.4 bits (130), Expect = 4e-08
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 80 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 253
A K DPIQ+LF+DKIREYK K ++GG V DAS +G D
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYHQELERELFKLKQMFGNA---D 86
Query: 254 MTAFPSLKFEEPKLDPIDEQAA 319
M FP+ KFE+PK + I++ A
Sbjct: 87 MNTFPTFKFEDPKFEVIEKPQA 108
>M37104-1|AAA51807.1| 108|Homo sapiens ATPase coupling factor 6
subunit protein.
Length = 108
Score = 56.4 bits (130), Expect = 4e-08
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 80 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 253
A K DPIQ+LF+DKIREYK K ++GG V DAS +G D
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86
Query: 254 MTAFPSLKFEEPKLDPIDEQAA 319
M FP+ KFE+PK + I++ A
Sbjct: 87 MNTFPTFKFEDPKFEVIEKPQA 108
>CR456950-1|CAG33231.1| 108|Homo sapiens ATP5J protein.
Length = 108
Score = 56.4 bits (130), Expect = 4e-08
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 80 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 253
A K DPIQ+LF+DKIREYK K ++GG V DAS +G D
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86
Query: 254 MTAFPSLKFEEPKLDPIDEQAA 319
M FP+ KFE+PK + I++ A
Sbjct: 87 MNTFPTFKFEDPKFEVIEKPQA 108
>BT007244-1|AAP35908.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 56.4 bits (130), Expect = 4e-08
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 80 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 253
A K DPIQ+LF+DKIREYK K ++GG V DAS +G D
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86
Query: 254 MTAFPSLKFEEPKLDPIDEQAA 319
M FP+ KFE+PK + I++ A
Sbjct: 87 MNTFPTFKFEDPKFEVIEKPQA 108
>BC001178-1|AAH01178.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 56.4 bits (130), Expect = 4e-08
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 80 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 253
A K DPIQ+LF+DKIREYK K ++GG V DAS +G D
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86
Query: 254 MTAFPSLKFEEPKLDPIDEQAA 319
M FP+ KFE+PK + I++ A
Sbjct: 87 MNTFPTFKFEDPKFEVIEKPQA 108
>AY544129-1|AAT11160.1| 108|Homo sapiens proliferation-inducing
protein 36 protein.
Length = 108
Score = 56.4 bits (130), Expect = 4e-08
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 80 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 253
A K DPIQ+LF+DKIREYK K ++GG V DAS +G D
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86
Query: 254 MTAFPSLKFEEPKLDPIDEQAA 319
M FP+ KFE+PK + I++ A
Sbjct: 87 MNTFPTFKFEDPKFEVIEKPQA 108
>BC066310-1|AAH66310.1| 108|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit F6
protein.
Length = 108
Score = 52.8 bits (121), Expect = 4e-07
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 80 AAQKATDPIQQLFLDKIREYKQK--SAGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGID 253
A K DPIQ+LF+DKIREYK K ++GG V DAS +G D
Sbjct: 31 AFNKELDPIQKLFVDKIREYKSKRQTSGGPV-DASSEYQQELERELFKLKQMFGNA---D 86
Query: 254 MTAFPSLKFEEPKLDPIDEQAA 319
M F + KFE+PK + I++ A
Sbjct: 87 MNTFHTFKFEDPKFEVIEKPQA 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,448,132
Number of Sequences: 237096
Number of extensions: 1251028
Number of successful extensions: 1599
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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