Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310G05f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q94887 Cluster: Neurexin-4 precursor; n=9; Endopterygot... 43 0.005
UniRef50_Q8BPP6 Cluster: 0 day neonate eyeball cDNA, RIKEN full-... 42 0.009
UniRef50_Q4SWH5 Cluster: Chromosome 1 SCAF13619, whole genome sh... 42 0.011
UniRef50_Q4RJ05 Cluster: Chromosome undetermined SCAF15040, whol... 41 0.015
UniRef50_UPI0000F1E5DD Cluster: PREDICTED: hypothetical protein;... 41 0.020
UniRef50_Q9C0A0 Cluster: Contactin-associated protein-like 4 pre... 41 0.020
UniRef50_Q9UDV4 Cluster: Putative uncharacterized protein CNTNAP... 40 0.046
UniRef50_Q9UHC6 Cluster: Contactin-associated protein-like 2 pre... 40 0.046
UniRef50_Q4SNM9 Cluster: Chromosome 15 SCAF14542, whole genome s... 39 0.060
UniRef50_Q8WYK1 Cluster: Contactin-associated protein-like 5; n=... 39 0.060
UniRef50_UPI0000F1DAB9 Cluster: PREDICTED: hypothetical protein;... 38 0.14
UniRef50_UPI0000015FE3 Cluster: Homolog of Homo sapiens "Contact... 38 0.14
UniRef50_Q4RTS1 Cluster: Chromosome 2 SCAF14997, whole genome sh... 37 0.24
UniRef50_Q9BZ76 Cluster: Contactin-associated protein-like 3 pre... 33 3.0
UniRef50_P78357 Cluster: Contactin-associated protein 1 precurso... 33 3.0
>UniRef50_Q94887 Cluster: Neurexin-4 precursor; n=9;
Endopterygota|Rep: Neurexin-4 precursor - Drosophila
melanogaster (Fruit fly)
Length = 1284
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAYHSV 8
+C TGYAGAVCHTS +PLSC A +V
Sbjct: 567 DCGHTGYAGAVCHTSNNPLSCLALKNV 593
>UniRef50_Q8BPP6 Cluster: 0 day neonate eyeball cDNA, RIKEN
full-length enriched library, clone:E130114F09
product:cell recognition protein CASPR4, full insert
sequence; n=4; Murinae|Rep: 0 day neonate eyeball cDNA,
RIKEN full-length enriched library, clone:E130114F09
product:cell recognition protein CASPR4, full insert
sequence - Mus musculus (Mouse)
Length = 1180
Score = 41.9 bits (94), Expect = 0.009
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH+SV+ SC+AY
Sbjct: 576 NCTNTGYTGATCHSSVYEQSCEAY 599
>UniRef50_Q4SWH5 Cluster: Chromosome 1 SCAF13619, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF13619, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1015
Score = 41.5 bits (93), Expect = 0.011
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC D+GY GA CH+S++ SC+AY
Sbjct: 511 NCSDSGYRGATCHSSIYEQSCEAY 534
>UniRef50_Q4RJ05 Cluster: Chromosome undetermined SCAF15040, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF15040, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1324
Score = 41.1 bits (92), Expect = 0.015
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC TGYAGA CHTS++ SC+ Y
Sbjct: 541 NCSGTGYAGATCHTSMYQQSCEEY 564
>UniRef50_UPI0000F1E5DD Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 746
Score = 40.7 bits (91), Expect = 0.020
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -2
Query: 133 QRGRRVCLVPNSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+ G R +S C TGY GA CHTSV+ SC+AY
Sbjct: 70 EHGGRCSQTWDSFTCTCDGTGYTGATCHTSVYEQSCEAY 108
>UniRef50_Q9C0A0 Cluster: Contactin-associated protein-like 4
precursor; n=47; Euteleostomi|Rep: Contactin-associated
protein-like 4 precursor - Homo sapiens (Human)
Length = 1308
Score = 40.7 bits (91), Expect = 0.020
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH S++ SC+AY
Sbjct: 574 NCTNTGYRGATCHNSIYEQSCEAY 597
>UniRef50_Q9UDV4 Cluster: Putative uncharacterized protein CNTNAP2;
n=3; Eutheria|Rep: Putative uncharacterized protein
CNTNAP2 - Homo sapiens (Human)
Length = 75
Score = 39.5 bits (88), Expect = 0.046
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 17 DSFKCTCDETGYSGATCHNSIYEPSCEAY 45
>UniRef50_Q9UHC6 Cluster: Contactin-associated protein-like 2
precursor; n=59; Euteleostomi|Rep: Contactin-associated
protein-like 2 precursor - Homo sapiens (Human)
Length = 1331
Score = 39.5 bits (88), Expect = 0.046
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAY 602
>UniRef50_Q4SNM9 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14542, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1182
Score = 39.1 bits (87), Expect = 0.060
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -2
Query: 94 RGNCRDTGYAGAVCHTSVHPLSCQAY 17
R NC +GY+GA CH+S + SC+AY
Sbjct: 546 RCNCSGSGYSGATCHSSAYERSCEAY 571
>UniRef50_Q8WYK1 Cluster: Contactin-associated protein-like 5; n=63;
Euteleostomi|Rep: Contactin-associated protein-like 5 -
Homo sapiens (Human)
Length = 1306
Score = 39.1 bits (87), Expect = 0.060
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC DT Y GA CH S++ SC+ Y
Sbjct: 571 NCSDTSYTGATCHNSIYEQSCEVY 594
>UniRef50_UPI0000F1DAB9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1175
Score = 37.9 bits (84), Expect = 0.14
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -2
Query: 85 CRDTGYAGAVCHTSVHPLSCQAY 17
C +TGY G VCH SV+ SC+AY
Sbjct: 592 CNNTGYKGEVCHNSVYRESCEAY 614
>UniRef50_UPI0000015FE3 Cluster: Homolog of Homo sapiens "Contactin
associated protein 1 precursor; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Contactin
associated protein 1 precursor - Takifugu rubripes
Length = 1202
Score = 37.9 bits (84), Expect = 0.14
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -2
Query: 85 CRDTGYAGAVCHTSVHPLSCQAY 17
C +TGY G VCH SV+ SC+AY
Sbjct: 547 CENTGYKGEVCHMSVYKESCEAY 569
>UniRef50_Q4RTS1 Cluster: Chromosome 2 SCAF14997, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 2
SCAF14997, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1393
Score = 37.1 bits (82), Expect = 0.24
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 133 QRGRRVCLVPNSARGNCRDTGYAGAVCHTSVHPLSCQAYHSVSA 2
+ G R +S +C +GY+G+ CH S++ SC+AY + +
Sbjct: 647 EHGGRCSQTWSSFSCDCSGSGYSGSTCHNSIYESSCEAYKLIGS 690
>UniRef50_Q9BZ76 Cluster: Contactin-associated protein-like 3
precursor; n=29; Tetrapoda|Rep: Contactin-associated
protein-like 3 precursor - Homo sapiens (Human)
Length = 1288
Score = 33.5 bits (73), Expect = 3.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>UniRef50_P78357 Cluster: Contactin-associated protein 1 precursor;
n=22; Amniota|Rep: Contactin-associated protein 1
precursor - Homo sapiens (Human)
Length = 1384
Score = 33.5 bits (73), Expect = 3.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 85 CRDTGYAGAVCHTSVHPLSCQAY 17
C TGY G CHT ++ SC+AY
Sbjct: 566 CELTGYKGETCHTPLYKESCEAY 588
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,375,374
Number of Sequences: 1657284
Number of extensions: 7900778
Number of successful extensions: 23533
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23527
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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