Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310G05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.54 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   0.94 
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   0.94 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.8  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.7  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 505 PVSIAIQPTDPSCSERPRPTRTSDA 431
           P   + QPT+ S +++P+ T+T ++
Sbjct: 411 PTQASEQPTESSTTQKPQTTKTPES 435


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 103 NSARGNCRDTGYAGAVCHT 47
           N  R +CRD  YA   CH+
Sbjct: 283 NVYRYSCRDCSYATKYCHS 301


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 103 NSARGNCRDTGYAGAVCHT 47
           N  R +CRD  YA   CH+
Sbjct: 41  NVYRYSCRDCSYATKYCHS 59


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 162 LLNCQNYIPNNVEEES 115
           LL C N+I NN++ E+
Sbjct: 254 LLTCLNFITNNLKSEN 269


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 162 LLNCQNYIPNNVEEES 115
           LL C N+I NN++ E+
Sbjct: 254 LLTCLNFITNNLKSEN 269


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 106 PNSARGNCRDTGYAGAVCHTSV 41
           P+ ++GN    GYA  V   +V
Sbjct: 95  PDCSKGNADQNGYASVVAAAAV 116


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 172 NTATFKLPKLYTQQRGR 122
           N  +  LP+ Y+Q RGR
Sbjct: 193 NLNSKSLPRQYSQSRGR 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,898
Number of Sequences: 336
Number of extensions: 1774
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)