Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310G05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens ... 41 0.003
AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protei... 41 0.003
AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein pr... 41 0.003
AB100093-1|BAC55271.1| 1235|Homo sapiens hypothetical protein pr... 41 0.003
AB100092-1|BAC55270.1| 1260|Homo sapiens hypothetical protein pr... 41 0.003
AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein. 41 0.003
BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated pr... 40 0.007
BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated pr... 40 0.007
AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated pr... 40 0.007
AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecu... 40 0.007
AC004896-1|AAC71656.1| 75|Homo sapiens unknown protein. 40 0.007
AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein. 40 0.007
AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens ... 39 0.009
AC097715-1|AAY24250.1| 271|Homo sapiens unknown protein. 39 0.009
AB077881-1|BAB83897.1| 1306|Homo sapiens caspr5 protein. 39 0.009
U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated prot... 33 0.46
CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated pr... 33 0.46
CR788268-4|CAI95048.1| 746|Homo sapiens contactin associated pr... 33 0.46
CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated pr... 33 0.46
BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated pr... 33 0.46
BX664735-3|CAI95321.1| 746|Homo sapiens contactin associated pr... 33 0.46
BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated pr... 33 0.46
BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated pr... 33 0.46
BX649569-3|CAI94998.1| 746|Homo sapiens contactin associated pr... 33 0.46
BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated pr... 33 0.46
BC132737-1|AAI32738.1| 1207|Homo sapiens CNTNAP3 protein protein. 33 0.46
AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated pr... 33 0.46
AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated pr... 33 0.46
AL353729-2|CAH72037.1| 745|Homo sapiens contactin associated pr... 33 0.46
AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated pr... 33 0.46
AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated pr... 33 0.46
AL162501-1|CAH70485.1| 745|Homo sapiens contactin associated pr... 33 0.46
AK056833-1|BAB71293.1| 745|Homo sapiens protein ( Homo sapiens ... 33 0.46
AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecu... 33 0.46
AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein. 33 0.46
BC038411-1|AAH38411.1| 770|Homo sapiens sema domain, immunoglob... 30 5.7
AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens ... 30 5.7
>AK057327-1|BAB71429.1| 721|Homo sapiens protein ( Homo sapiens
cDNA FLJ32765 fis, clone TESTI2001852, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 721
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH S++ SC+AY
Sbjct: 549 NCTNTGYRGATCHNSIYEQSCEAY 572
>AF463518-1|AAL68839.1| 1311|Homo sapiens cell recognition protein
CASPR4 protein.
Length = 1311
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH S++ SC+AY
Sbjct: 577 NCTNTGYRGATCHNSIYEQSCEAY 600
>AB100094-1|BAC55272.1| 1308|Homo sapiens hypothetical protein
protein.
Length = 1308
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH S++ SC+AY
Sbjct: 574 NCTNTGYRGATCHNSIYEQSCEAY 597
>AB100093-1|BAC55271.1| 1235|Homo sapiens hypothetical protein
protein.
Length = 1235
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH S++ SC+AY
Sbjct: 501 NCTNTGYRGATCHNSIYEQSCEAY 524
>AB100092-1|BAC55270.1| 1260|Homo sapiens hypothetical protein
protein.
Length = 1260
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH S++ SC+AY
Sbjct: 526 NCTNTGYRGATCHNSIYEQSCEAY 549
>AB051550-1|BAB21854.2| 1322|Homo sapiens KIAA1763 protein protein.
Length = 1322
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC +TGY GA CH S++ SC+AY
Sbjct: 588 NCTNTGYRGATCHNSIYEQSCEAY 611
>BC113373-1|AAI13374.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAY 602
>BC093780-1|AAH93780.1| 1331|Homo sapiens contactin associated
protein-like 2 protein.
Length = 1331
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAY 602
>AF319045-1|AAK34932.1| 1331|Homo sapiens contactin-associated
protein 2 protein.
Length = 1331
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAY 602
>AF193613-1|AAF25199.1| 1331|Homo sapiens cell recognition molecule
Caspr2 protein.
Length = 1331
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 574 DSFKCTCDETGYSGATCHNSIYEPSCEAY 602
>AC004896-1|AAC71656.1| 75|Homo sapiens unknown protein.
Length = 75
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 17 DSFKCTCDETGYSGATCHNSIYEPSCEAY 45
>AB020675-1|BAA74891.1| 1339|Homo sapiens KIAA0868 protein protein.
Length = 1339
Score = 39.5 bits (88), Expect = 0.007
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 103 NSARGNCRDTGYAGAVCHTSVHPLSCQAY 17
+S + C +TGY+GA CH S++ SC+AY
Sbjct: 582 DSFKCTCDETGYSGATCHNSIYEPSCEAY 610
>AK056528-1|BAB71205.1| 963|Homo sapiens protein ( Homo sapiens
cDNA FLJ31966 fis, clone NT2RP7007925, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 963
Score = 39.1 bits (87), Expect = 0.009
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC DT Y GA CH S++ SC+ Y
Sbjct: 572 NCSDTSYTGATCHNSIYEQSCEVY 595
>AC097715-1|AAY24250.1| 271|Homo sapiens unknown protein.
Length = 271
Score = 39.1 bits (87), Expect = 0.009
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC DT Y GA CH S++ SC+ Y
Sbjct: 218 NCSDTSYTGATCHNSIYEQSCEVY 241
>AB077881-1|BAB83897.1| 1306|Homo sapiens caspr5 protein.
Length = 1306
Score = 39.1 bits (87), Expect = 0.009
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
NC DT Y GA CH S++ SC+ Y
Sbjct: 571 NCSDTSYTGATCHNSIYEQSCEVY 594
>U87223-1|AAB48481.1| 1384|Homo sapiens contactin associated protein
protein.
Length = 1384
Score = 33.5 bits (73), Expect = 0.46
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 85 CRDTGYAGAVCHTSVHPLSCQAY 17
C TGY G CHT ++ SC+AY
Sbjct: 566 CELTGYKGETCHTPLYKESCEAY 588
>CR788268-5|CAI95050.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>CR788268-4|CAI95048.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>CR788268-2|CAI95046.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 620 DCLGTGYTGETCHSSLYEQSCEAH 643
>BX664735-4|CAI16326.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>BX664735-3|CAI95321.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>BX664735-1|CAI16324.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 620 DCLGTGYTGETCHSSLYEQSCEAH 643
>BX649569-4|CAI12628.1| 1288|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1288
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>BX649569-3|CAI94998.1| 746|Homo sapiens contactin associated
protein-like 3B protein.
Length = 746
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>BX649569-1|CAI12626.1| 1175|Homo sapiens contactin associated
protein-like 3B protein.
Length = 1175
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 620 DCLGTGYTGETCHSSLYEQSCEAH 643
>BC132737-1|AAI32738.1| 1207|Homo sapiens CNTNAP3 protein protein.
Length = 1207
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>AL353729-6|CAH72042.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 484 DCLGTGYTGETCHSSLYEQSCEAH 507
>AL353729-3|CAH72039.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>AL353729-2|CAH72037.1| 745|Homo sapiens contactin associated
protein-like 3 protein.
Length = 745
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>AL162501-4|CAH70490.1| 1039|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1039
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 484 DCLGTGYTGETCHSSLYEQSCEAH 507
>AL162501-2|CAH70488.1| 1288|Homo sapiens contactin associated
protein-like 3 protein.
Length = 1288
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>AL162501-1|CAH70485.1| 745|Homo sapiens contactin associated
protein-like 3 protein.
Length = 745
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>AK056833-1|BAB71293.1| 745|Homo sapiens protein ( Homo sapiens
cDNA FLJ32271 fis, clone PROST1000536, weakly similar to
Homo sapiens contactin associated protein (Caspr) mRNA.
).
Length = 745
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>AF333769-1|AAG52889.2| 1288|Homo sapiens cell recognition molecule
CASPR3 protein.
Length = 1288
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 572 DCLGTGYTGETCHSSLYEQSCEAH 595
>AB051501-1|BAB21805.2| 1175|Homo sapiens KIAA1714 protein protein.
Length = 1175
Score = 33.5 bits (73), Expect = 0.46
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 88 NCRDTGYAGAVCHTSVHPLSCQAY 17
+C TGY G CH+S++ SC+A+
Sbjct: 620 DCLGTGYTGETCHSSLYEQSCEAH 643
>BC038411-1|AAH38411.1| 770|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 770
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 187 LAVSLNTATFKLPKLYTQQRGRRV-CLVPNSARGNCRDTGYAGAVCHTSVHPLS 29
L V F L ++ +R RR+ +VP + R NCR G CH V L+
Sbjct: 77 LYVGARDTIFALSLPFSGERPRRIDWMVPEAHRQNCRKKGKKEDECHNFVQILA 130
>AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens
cDNA PSEC0074 fis, clone NT2RP2003050, highly similar to
Mus musculus mRNA for semaphorin W. ).
Length = 770
Score = 29.9 bits (64), Expect = 5.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 187 LAVSLNTATFKLPKLYTQQRGRRV-CLVPNSARGNCRDTGYAGAVCHTSVHPLS 29
L V F L ++ +R RR+ +VP + R NCR G CH V L+
Sbjct: 77 LYVGARDTIFALSLPFSGERPRRIDWMVPEAHRQNCRKKGKKEDECHNFVQILA 130
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,343,849
Number of Sequences: 237096
Number of extensions: 1223281
Number of successful extensions: 2754
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2754
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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