Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310G05f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087232-1|AAK09079.2|  574|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z80216-11|CAN99667.1|  984|Caenorhabditis elegans Hypothetical p...    27   8.1  
Z80216-10|CAB02286.4|  949|Caenorhabditis elegans Hypothetical p...    27   8.1  
AL023823-2|CAN99714.1|  984|Caenorhabditis elegans Hypothetical ...    27   8.1  
AL023823-1|CAA19441.4|  949|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AC087232-1|AAK09079.2|  574|Caenorhabditis elegans Hypothetical
           protein Y92H12BR.7 protein.
          Length = 574

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = -2

Query: 475 PSCSERPRPTRTSDATRYRSNLSRATFVAGIRRTVSLRVASHRIARPGRRVSEKRTNKTK 296
           P  S+ P P         R  L + T V G+R  + +R A  + A+     +EKR N   
Sbjct: 87  PLISQAPPPVNPMSEF-VRQTLMKNTHVPGLRTGLQMRDAIKKRAKAREIPAEKRANVAT 145

Query: 295 TNVKFGV 275
             V+F V
Sbjct: 146 IPVQFSV 152


>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
           protein F20B10.1 protein.
          Length = 1180

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 88  NCRDTGYAGAVCHTSVHPLSCQAY 17
           NC++ GY G  CHT+  P SC+ +
Sbjct: 470 NCKE-GYKGKNCHTTDLPHSCEEW 492


>Z80216-11|CAN99667.1|  984|Caenorhabditis elegans Hypothetical
           protein F10G8.8b protein.
          Length = 984

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 PTDPSCSERPRPTRTSDA 431
           P  PSC E P PT T+++
Sbjct: 250 PVSPSCQEEPTPTSTTNS 267


>Z80216-10|CAB02286.4|  949|Caenorhabditis elegans Hypothetical
           protein F10G8.8a protein.
          Length = 949

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 PTDPSCSERPRPTRTSDA 431
           P  PSC E P PT T+++
Sbjct: 250 PVSPSCQEEPTPTSTTNS 267


>AL023823-2|CAN99714.1|  984|Caenorhabditis elegans Hypothetical
           protein F10G8.8b protein.
          Length = 984

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 PTDPSCSERPRPTRTSDA 431
           P  PSC E P PT T+++
Sbjct: 250 PVSPSCQEEPTPTSTTNS 267


>AL023823-1|CAA19441.4|  949|Caenorhabditis elegans Hypothetical
           protein F10G8.8a protein.
          Length = 949

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 484 PTDPSCSERPRPTRTSDA 431
           P  PSC E P PT T+++
Sbjct: 250 PVSPSCQEEPTPTSTTNS 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,140,252
Number of Sequences: 27780
Number of extensions: 177822
Number of successful extensions: 579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)