Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310G04f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.8  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   7.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.7  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 126 SKTRCCFPEE 155
           SKT+CCF ++
Sbjct: 442 SKTKCCFAQD 451


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 95 LIFDLCLKFGGDNHKAMSTTLITL 24
          +IF +C+  G   H+ + T + TL
Sbjct: 6  IIFAICVCVGAMTHEELKTGIQTL 29


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 205 NFQQLLFPKH 234
           NFQQLLF K+
Sbjct: 366 NFQQLLFSKY 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,801
Number of Sequences: 438
Number of extensions: 2529
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)