BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310G01f (521 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 253 2e-67 BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 253 2e-67 BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 253 2e-67 AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 253 2e-67 AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 253 2e-67 AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 253 2e-67 U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 251 1e-66 BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 8e-49 AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 150 3e-36 U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 29 9.9 >BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 253 bits (620), Expect = 2e-67 Identities = 117/167 (70%), Positives = 131/167 (78%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 379 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 380 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 167 >BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 253 bits (620), Expect = 2e-67 Identities = 117/167 (70%), Positives = 131/167 (78%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 379 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 380 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 167 >BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 253 bits (620), Expect = 2e-67 Identities = 117/167 (70%), Positives = 131/167 (78%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 379 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 380 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 167 >AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 253 bits (620), Expect = 2e-67 Identities = 117/167 (70%), Positives = 131/167 (78%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 379 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 380 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 167 >AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 variant protein. Length = 297 Score = 253 bits (620), Expect = 2e-67 Identities = 117/167 (70%), Positives = 131/167 (78%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 379 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 380 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 167 >AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 variant protein. Length = 303 Score = 253 bits (620), Expect = 2e-67 Identities = 117/167 (70%), Positives = 131/167 (78%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 379 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127 Query: 380 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 174 >U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 251 bits (615), Expect = 1e-66 Identities = 116/167 (69%), Positives = 130/167 (77%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 379 CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 380 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 167 >BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. Length = 101 Score = 192 bits (467), Expect = 8e-49 Identities = 84/98 (85%), Positives = 95/98 (96%) Frame = +2 Query: 20 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 199 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 200 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 313 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98 >AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 protein. Length = 126 Score = 150 bits (364), Expect = 3e-36 Identities = 70/117 (59%), Positives = 82/117 (70%) Frame = +2 Query: 170 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 349 +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60 Query: 350 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAV 520 EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAV Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAV 117 >U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein protein. Length = 145 Score = 29.1 bits (62), Expect = 9.9 Identities = 12/15 (80%), Positives = 14/15 (93%) Frame = +2 Query: 476 TTTGARVFGAMKGAV 520 TTTG +VFGA+KGAV Sbjct: 1 TTTGNKVFGALKGAV 15 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 75,059,745 Number of Sequences: 237096 Number of extensions: 1520341 Number of successful extensions: 2935 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2803 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2927 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 4990119376 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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