Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310F10f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000242-1|AAH00242.1| 190|Homo sapiens mitochondrial ribosomal... 91 3e-18
AF151896-1|AAD34133.1| 153|Homo sapiens CGI-138 protein protein. 90 5e-18
BC005149-1|AAH05149.1| 580|Homo sapiens mucolipin 1 protein. 30 5.7
AK222673-1|BAD96393.1| 580|Homo sapiens mucolipin 1 variant pro... 30 5.7
AK026102-1|BAB15360.1| 580|Homo sapiens protein ( Homo sapiens ... 30 5.7
AJ293970-1|CAC08215.1| 580|Homo sapiens mucolipidin protein. 30 5.7
AJ293659-1|CAC07813.1| 545|Homo sapiens mucolipidin protein. 30 5.7
AF305579-1|AAG42242.1| 581|Homo sapiens mucolipin 1 protein. 30 5.7
AF287270-1|AAG00798.1| 580|Homo sapiens mucolipin protein. 30 5.7
AF287269-1|AAG00797.1| 580|Homo sapiens mucolipin protein. 30 5.7
AF249319-1|AAG10422.1| 580|Homo sapiens mucolipidosis type IV p... 30 5.7
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 29 9.9
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 29 9.9
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 29 9.9
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 29 9.9
>BC000242-1|AAH00242.1| 190|Homo sapiens mitochondrial ribosomal
protein S23 protein.
Length = 190
Score = 90.6 bits (215), Expect = 3e-18
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Frame = +1
Query: 106 MASSRLERIGTIFTRVEGLLSRGAMKPDDRPLWFDVYKAFPPITEPKYARPNL----VVK 273
MA SRLE +G+IF+R L+ G +K ++PLWFDVY AFPP+ EP + RP +
Sbjct: 1 MAGSRLETVGSIFSRTRDLVRAGVLK--EKPLWFDVYDAFPPLREPVFQRPRVRYGKAKA 58
Query: 274 EIRPILYKEDVLRAKFHS-NGYGLAPVSLLNQSNETQTKRLVQQYDELKAEG-IPEDEII 447
I+ I Y ED +RAKF+S G G L N + ++ +R V++Y EL+ G E+++
Sbjct: 59 PIQDIWYHEDRIRAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEKYTELQKLGETDEEKLF 118
Query: 448 EKAAQAVAVE 477
+ +A+ E
Sbjct: 119 VETGKALLAE 128
>AF151896-1|AAD34133.1| 153|Homo sapiens CGI-138 protein protein.
Length = 153
Score = 89.8 bits (213), Expect = 5e-18
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Frame = +1
Query: 106 MASSRLERIGTIFTRVEGLLSRGAMKPDDRPLWFDVYKAFPPITEPKYARPNL----VVK 273
MA SRLE +G IF+R L+ G +K ++PLWFDVY AFPP+ EP + RP +
Sbjct: 1 MAGSRLETVGCIFSRTRDLVRAGVLK--EKPLWFDVYDAFPPLREPVFQRPRVRYGKAKA 58
Query: 274 EIRPILYKEDVLRAKFHS-NGYGLAPVSLLNQSNETQTKRLVQQYDELKAEG-IPEDEII 447
I+ I Y ED +RAKF+S G G L N + ++ +R V++Y EL+ G E+++
Sbjct: 59 PIQDIWYHEDRIRAKFYSVYGSGQRAFDLFNPNFKSTCQRFVEKYTELQKLGETDEEKLF 118
Query: 448 EKAAQAVAVE 477
+ +A+ E
Sbjct: 119 VETGKALLAE 128
>BC005149-1|AAH05149.1| 580|Homo sapiens mucolipin 1 protein.
Length = 580
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 426 MRFCCCVAVIYLGYCFCGWI 445
>AK222673-1|BAD96393.1| 580|Homo sapiens mucolipin 1 variant
protein.
Length = 580
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 426 MRFCCCVAVIYLGYCFCGWI 445
>AK026102-1|BAB15360.1| 580|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22449 fis, clone HRC09609. ).
Length = 580
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 426 MRFCCCVAVIYLGYCFCGWI 445
>AJ293970-1|CAC08215.1| 580|Homo sapiens mucolipidin protein.
Length = 580
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 426 MRFCCCVAVIYLGYCFCGWI 445
>AJ293659-1|CAC07813.1| 545|Homo sapiens mucolipidin protein.
Length = 545
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 391 MRFCCCVAVIYLGYCFCGWI 410
>AF305579-1|AAG42242.1| 581|Homo sapiens mucolipin 1 protein.
Length = 581
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 427 MRFCCCVAVIYLGYCFCGWI 446
>AF287270-1|AAG00798.1| 580|Homo sapiens mucolipin protein.
Length = 580
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 426 MRFCCCVAVIYLGYCFCGWI 445
>AF287269-1|AAG00797.1| 580|Homo sapiens mucolipin protein.
Length = 580
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 426 MRFCCCVAVIYLGYCFCGWI 445
>AF249319-1|AAG10422.1| 580|Homo sapiens mucolipidosis type IV
protein protein.
Length = 580
Score = 29.9 bits (64), Expect = 5.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 507 IQFLCSIAVAFDGYCLCGFL 448
++F C +AV + GYC CG++
Sbjct: 426 MRFCCCVAVIYLGYCFCGWI 445
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 234 DWRESFVYIKPQGSVIRFHCSSAKKTFNSGKYCTNSFQS 118
D + F Y G+V RF S +K+T NS Y F+S
Sbjct: 57 DETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFES 95
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 234 DWRESFVYIKPQGSVIRFHCSSAKKTFNSGKYCTNSFQS 118
D + F Y G+V RF S +K+T NS Y F+S
Sbjct: 57 DETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFES 95
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 234 DWRESFVYIKPQGSVIRFHCSSAKKTFNSGKYCTNSFQS 118
D + F Y G+V RF S +K+T NS Y F+S
Sbjct: 57 DETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFES 95
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 234 DWRESFVYIKPQGSVIRFHCSSAKKTFNSGKYCTNSFQS 118
D + F Y G+V RF S +K+T NS Y F+S
Sbjct: 57 DETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFES 95
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,907,492
Number of Sequences: 237096
Number of extensions: 1166959
Number of successful extensions: 2602
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2598
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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