Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310F10f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22176-6|CAA80139.1| 133|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine re... 31 0.66
AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kina... 29 2.0
AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascul... 29 2.0
Z68317-5|CAA92689.2| 165|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 28 4.7
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 27 8.1
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 27 8.1
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 27 8.1
AF000266-7|AAC71173.1| 212|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z22176-6|CAA80139.1| 133|Caenorhabditis elegans Hypothetical
protein ZK1098.7 protein.
Length = 133
Score = 78.6 bits (185), Expect = 3e-15
Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Frame = +1
Query: 115 SRLERIGTIFTRVEGLLSRGAMKPDDRPLWFDVYKAFPPITEPKY-ARPNLVVKEIRPIL 291
+R ER G IF+RV GL+ G + DRPLW+DVY + PP+T P + + + IR I
Sbjct: 6 TRAERSGNIFSRVTGLIRAGQLNWADRPLWYDVYVSSPPLTPPDWNVKLAKYDEPIRSIF 65
Query: 292 YKEDVLRAKFHSNGYGLAPVSLLNQSNETQTKRLVQQYDELKAEG--IPEDEIIE 450
Y+EDVLRAKF+ A + ++ S + +++ + +Y +K+E +D++ E
Sbjct: 66 YEEDVLRAKFYKTYRSTAGIQ-VDSSRTSVSQQFINEYKLVKSENAEATDDQLFE 119
>AF067945-1|AAC17679.1| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 31 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.66
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = -3
Query: 303 VFLV*DWSYFFDY--KIRTCIFRFGDWRESFVYIKPQGSVIRFHCSSAKKTFNSGKYCTN 130
VFL +W +F +Y K+ C F F W YI R S+ K + SG + +
Sbjct: 25 VFLTKNWKHFDNYFLKLYICQFFFNMWMYWNFYI-----TSRLPASTCKDCYLSGWFDSL 79
Query: 129 SFQSATGHVKKFFLKLLARLIYVSLMQTNNLFL 31
S S + KFF+ ++ M +NLFL
Sbjct: 80 SKDSGSMFPFKFFIFC---QYHLGFMSYSNLFL 109
>AF188751-1|AAF00548.1| 1083|Caenorhabditis elegans tyrosine kinase
receptor T17A3.1 protein.
Length = 1083
Score = 29.1 bits (62), Expect = 2.0
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +1
Query: 193 RPLWFDVYKAFPPITEPKYARPNLVVKEIRPILYKEDVLRAKFHSNGYGL-APVSLLNQS 369
R +W KA I + P + ++R + L+AK S L A ++
Sbjct: 329 RCIWKKTGKARQEIEHSLHVSPTIA--QVRILEQSPSFLKAKAGSGSVKLYAKFAVYPAG 386
Query: 370 NETQTKRLVQQYDELKAEGIPEDEIIEKAAQAVAVERHSYAAQKLNVT 513
N T T R + Y+ + EG P DEI+EK A +E +S + + L++T
Sbjct: 387 NYTVTWR--RTYNSI--EG-PRDEIVEKGLSATFLE-NSESMEVLDIT 428
>AF078787-11|AAC26948.2| 1083|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 1
protein.
Length = 1083
Score = 29.1 bits (62), Expect = 2.0
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +1
Query: 193 RPLWFDVYKAFPPITEPKYARPNLVVKEIRPILYKEDVLRAKFHSNGYGL-APVSLLNQS 369
R +W KA I + P + ++R + L+AK S L A ++
Sbjct: 329 RCIWKKTGKARQEIEHSLHVSPTIA--QVRILEQSPSFLKAKAGSGSVKLYAKFAVYPAG 386
Query: 370 NETQTKRLVQQYDELKAEGIPEDEIIEKAAQAVAVERHSYAAQKLNVT 513
N T T R + Y+ + EG P DEI+EK A +E +S + + L++T
Sbjct: 387 NYTVTWR--RTYNSI--EG-PRDEIVEKGLSATFLE-NSESMEVLDIT 428
>Z68317-5|CAA92689.2| 165|Caenorhabditis elegans Hypothetical
protein T01H3.5 protein.
Length = 165
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +1
Query: 292 YKEDVLRAKFHSNGYGLAPVSLLNQSNETQTKRLVQQYDELKAEGIPEDEIIEKAAQAVA 471
+K DVLR F YG++ + +LN+ ++ +L + + + I E+ EK +
Sbjct: 3 WKNDVLR--FSGFDYGVSKIRMLNEELHSECDQLSKSNESTSLKDITEEPKDEKLESIIE 60
Query: 472 VERHSYAAQKLN 507
++ + ++ N
Sbjct: 61 TAKNKESEKEEN 72
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 271 KEIRPILYKEDVLRAKFHSNGYGLAPVSLLNQSNETQTKRLVQQYDE 411
K +RP+ D L+ KF +N L V +NQ T +Q YD+
Sbjct: 42 KAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 47 VCISETYINRANNFRKNFLTWPVADWKELVQ 139
+ I +T +N N RK +PV W + +Q
Sbjct: 958 LAILDTVVNHLNLVRKKHANFPVITWPDFIQ 988
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 136 YQFFPICYWPC 104
+ FFPICYW C
Sbjct: 51 FLFFPICYWLC 61
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 47 VCISETYINRANNFRKNFLTWPVADWKELVQ 139
+ I +T +N N RK +PV W + +Q
Sbjct: 958 LAILDTVVNHLNLVRKKHANFPVITWPDFIQ 988
>AF000266-7|AAC71173.1| 212|Caenorhabditis elegans Hypothetical
protein W08F4.9 protein.
Length = 212
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 391 LVQQYDELKAEGIPEDEIIEKAAQAVAVERHSYAAQKLNV 510
LVQ Y+ELK + +E+ ++ + HS A+ +N+
Sbjct: 91 LVQNYEELKVTNLTLNEVFLSNSRTLRSLHHSMTAKDVNL 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,601,353
Number of Sequences: 27780
Number of extensions: 211451
Number of successful extensions: 617
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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