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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310F09f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0098 + 25560158-25560925                                         32   0.32 
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    31   0.56 
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921...    31   0.56 
06_01_0350 + 2534422-2535615                                           31   0.74 
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729...    29   1.7  
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199...    29   3.0  
04_03_0732 + 19095320-19095827,19095848-19096621,19096863-190969...    29   3.0  
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414     28   4.0  
12_02_0854 + 23697826-23698033,23699111-23699276,23699430-236994...    28   5.2  
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172...    28   5.2  
05_04_0162 + 18645459-18645827,18645934-18646149,18646224-186462...    28   5.2  
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820...    28   5.2  
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853     28   5.2  
02_04_0628 + 24589313-24589472,24589604-24589765,24589850-245899...    27   9.1  
01_01_0012 + 71903-72935,73468-73981,74619-76008                       27   9.1  

>05_06_0098 + 25560158-25560925
          Length = 255

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -1

Query: 416 HRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATSP 237
           HRP P P  +   P L  +P + V   I   P PT F + +      ++++   +  T P
Sbjct: 31  HRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQADTASFKQVVQMLTGSDTTPP 90


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = -1

Query: 437 TNIDQTRH------RPHPLPVQTRHAPVLRANP 357
           T IDQ  H      + H +PVQ  H+PVL+ NP
Sbjct: 324 TQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNP 356


>02_02_0346 -
           9214365-9214583,9214830-9214919,9215012-9215177,
           9215601-9215911,9215944-9216566,9216779-9216968,
           9217096-9217197,9217285-9217425,9217815-9218411,
           9219126-9219286,9220709-9220824,9221538-9221654,
           9221746-9221808,9221879-9221949
          Length = 988

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
 Frame = -2

Query: 229 PSPEFSRSA-ESIRTPPQM------RCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAAS 71
           P P+ SRS  ES R  P          S   +  +   GFHG   L+   KL PDL +  
Sbjct: 168 PPPKRSRSKQESSRASPMKLIKLYPHMSGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWL 226

Query: 70  SGHFGLPRRTLVFKDEGTI 14
             HF      LVF   G I
Sbjct: 227 MEHFNPATNQLVFPGRGAI 245


>06_01_0350 + 2534422-2535615
          Length = 397

 Score = 30.7 bits (66), Expect = 0.74
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 131 PWNSNAQAEKKTLPGPLGGVFRP 63
           PW S+A+ E+K LP PL  +F P
Sbjct: 42  PWRSSARLERKLLPPPLPWLFLP 64


>12_01_0796 +
           7292523-7292783,7292963-7293018,7295274-7295331,
           7295777-7295843,7296461-7296516,7296638-7296691,
           7296836-7296961
          Length = 225

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 407 HPLPVQTRHAPVLRANPYSEVTDPICRLPL 318
           H L +  RH P L+A P S +    C+LPL
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPL 136


>06_01_0268 +
           1989069-1989293,1989938-1990020,1990136-1990357,
           1990434-1990621,1990711-1990835,1990988-1991039,
           1991585-1991874,1992229-1992307,1992527-1992657
          Length = 464

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 401 LPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEAL 288
           +P Q + A  + A+P + V    C LP P+LF  L  L
Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329


>04_03_0732 +
           19095320-19095827,19095848-19096621,19096863-19096906,
           19097191-19097250
          Length = 461

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 413 RPHPLPVQTRHAPVLRANPYSEVTDP 336
           RP+PL V +RHA VL    +  V DP
Sbjct: 133 RPNPLDVVSRHAGVLSRGDHCLVVDP 158


>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
          Length = 520

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 315 YIILSTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSG 190
           + +L+ RG  P +PAA     RRD   ++P  + Q P    G
Sbjct: 28  HAVLAVRGPRPLQPAASASFRRRDRWFHLPLHDPQPPPAAEG 69


>12_02_0854 +
           23697826-23698033,23699111-23699276,23699430-23699466,
           23699531-23700145
          Length = 341

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -2

Query: 439 ARTSTRPGTGRIRFPSKPDTPRSSE 365
           A TST PG GR R PS P TP  S+
Sbjct: 16  AATSTDPGRGRKRPPS-PSTPTPSD 39


>11_08_0081 -
           28216179-28216381,28216590-28216657,28217131-28217298,
           28217370-28217436,28217509-28217576,28218256-28218420,
           28218490-28218556,28218629-28218696,28219855-28219992,
           28220189-28220353,28221227-28221304,28221380-28221532,
           28222753-28222823,28223077-28223203,28223306-28223565,
           28223679-28223842,28224287-28224450,28225873-28226159
          Length = 826

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = -1

Query: 455 LKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP--ICRLPLPTLFYRLEALHL 282
           +K +   N+D    RP P PV       LRA PY     P  +  + L  +   L ++++
Sbjct: 1   MKPSPAANLDVRVERPRPPPVHPHRPGSLRARPYYRRWTPWIVAAIALSCVVVFLVSMYV 60

Query: 281 GDLLR 267
            D  R
Sbjct: 61  NDCPR 65


>05_04_0162 +
           18645459-18645827,18645934-18646149,18646224-18646278,
           18646545-18646672,18647134-18647217,18648742-18648867,
           18648949-18649086
          Length = 371

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 427 TRPGTGRIRFPSKPDTPRSSEPILIPKLR 341
           TRP TG+   P K D  RS   + I KLR
Sbjct: 108 TRPRTGKAALPLKRDRTRSKRFLEIQKLR 136


>02_05_0300 +
           27681204-27681656,27681745-27681840,27681933-27682022,
           27682126-27682227,27682310-27682456,27683608-27683748,
           27683749-27683808,27685133-27685230,27685308-27685410,
           27685954-27686037
          Length = 457

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
 Frame = +3

Query: 141 EGRYGSEREEHRICGGVRILSADLENSGEGCT-WRC-RAGSYPYPQQVSKVKSL*SIE*C 314
           +GR+G++R  HR+  G    +A    SG+ C  WR  R   +P P   S++    +    
Sbjct: 6   DGRFGNKRVHHRL--GPANGAASSSTSGKVCIHWRAGRCNRFPCPYLHSELPEATAKRPS 63

Query: 315 R*GKSANWIRNFGIRIGSEDRGVSGLDG 398
           + G   N  RN     G   RG  G  G
Sbjct: 64  QSGGGGNVWRN-PHSGGGGGRGAGGAGG 90


>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
          Length = 625

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -2

Query: 268 GYGYEPARHLHVHPSPEFSRSAES-IRTPPQMRCSSRSEPYLPSI 137
           G+   P+ H    P P+      S  R PP  R S RSE   P +
Sbjct: 26  GFDVTPSPHAEPSPRPQLRHDNPSRSRVPPLERVSRRSEVVFPPL 70


>02_04_0628 +
           24589313-24589472,24589604-24589765,24589850-24589983,
           24590108-24590275,24590481-24590562,24590734-24591512
          Length = 494

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 392 QTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIW 261
           + RH P++  +   EV+  +  L L    Y ++ L + +LL +W
Sbjct: 100 ELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLW 143


>01_01_0012 + 71903-72935,73468-73981,74619-76008
          Length = 978

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 229 PSPEFSRSAESIRTPPQMRCSSRSEPYLPSI 137
           PSP   RS    R+P + R S RS  Y P +
Sbjct: 518 PSPSARRSKSRSRSPIKYRRSRRSRSYSPPV 548


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,337,494
Number of Sequences: 37544
Number of extensions: 350733
Number of successful extensions: 1303
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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