Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310F09f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g07220.1 68414.m00768 expressed protein 40 8e-04
At1g76965.1 68414.m08961 glycine-rich protein 29 1.4
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 29 1.9
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 29 1.9
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 2.5
At5g42370.1 68418.m05159 expressed protein 29 2.5
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 2.5
At2g19150.1 68415.m02235 pectinesterase family protein contains ... 29 2.5
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 3.3
At5g22390.1 68418.m02612 expressed protein 27 5.8
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 27 5.8
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 27 7.7
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 27 7.7
At2g05210.1 68415.m00549 expressed protein 27 7.7
At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase fa... 27 7.7
At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase fa... 27 7.7
>At1g07220.1 68414.m00768 expressed protein
Length = 507
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -2
Query: 409 RIRFPSKPDTPRSSEPILIPKLRIQFADFP-YLHYSID*RLFTLETCCGYGYEPARHLHV 233
R+R P K +PRS +L+ L + F F L Y +D + +T G+ EP H+
Sbjct: 6 RLRLPHK-SSPRSPSYLLLCVLALSFFSFTALLFYKVDDFIAQTKTLAGHNLEPTPW-HI 63
Query: 232 HPSPEFSRSAESIRTPPQMRCSSRSEPY 149
P FS + + + ++CS S PY
Sbjct: 64 FPRKSFSAATKHSQAYRILQCSYFSCPY 91
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 421 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 326
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 487 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 311
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 487 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 311
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 207 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 73
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 146 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 36
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 9 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 140
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At2g19150.1 68415.m02235 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 339
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 177 ICGGVRILSADLENSGEGCTWRCRAGSYPYPQQV 278
I GG+ + ++ EGCT + R G YP P +V
Sbjct: 185 ISGGIDFIFGGAQSIFEGCTLKLRVGIYP-PNEV 217
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 202 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 104
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 81 ERSGKSFLFCLSVRVPWNPIEG 146
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 244 HLHVHPSPEFSRSAESIRTPPQMRCSSRSE 155
H H +P+ S S S+RTPP R +SR E
Sbjct: 229 HYHSTSTPQPSVSNFSLRTPPVDRSASRLE 258
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 461 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 336
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 461 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 336
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At2g05210.1 68415.m00549 expressed protein
Length = 364
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 202 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPR 47
+S T C+ +E Y +GF T TLR+KR L S +F PR
Sbjct: 282 DSTATLEAFLCNKDAE-YFWGLGFQDTETLRKKRNWL--LGIRESSNFVAPR 330
>At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 530
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 129 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 10
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 650
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 129 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 10
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,932,401
Number of Sequences: 28952
Number of extensions: 260996
Number of successful extensions: 780
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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