Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310F07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p pro...    32   0.54 
BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p pro...    30   1.7  
AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-P...    30   1.7  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    28   6.7  
AF287292-1|AAG00999.1|  729|Drosophila melanogaster Disco-relate...    28   8.8  

>AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p
           protein.
          Length = 68

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 499 IFIYFMLFLYXMCLKSYIK 443
           I+I+FM FLY +CL  Y+K
Sbjct: 8   IYIFFMFFLYILCLSLYVK 26


>BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p protein.
          Length = 1312

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -3

Query: 402  LNI*TEVKLRPATKLETIHLSNRPPFPQKEIYSSSEHS*SPVKQT 268
            +NI   V+L     LE   L  R P P+ EI    EH   P  +T
Sbjct: 968  ININNSVRLESDNGLEASELEEREPEPETEIEPEHEHEHEPEPET 1012


>AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-PA
            protein.
          Length = 1311

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -3

Query: 402  LNI*TEVKLRPATKLETIHLSNRPPFPQKEIYSSSEHS*SPVKQT 268
            +NI   V+L     LE   L  R P P+ EI    EH   P  +T
Sbjct: 967  ININNSVRLESDNGLEASELEEREPEPETEIEPEHEHEHEPEPET 1011


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -2

Query: 385 SKTQARN*TRNHP-PF*PSPVPTEGDLFFF*TLVIPRKTNNKHKKSVACVEQIVMF*NAS 209
           S+TQA+N T+NHP P   SP  T+ +       ++ R T ++ + ++  +++ +    AS
Sbjct: 586 SQTQAQNQTQNHPNPAKKSPAVTKPNYRALINDMLKRNTASEQELNLQIIKKTLNMEPAS 645

Query: 208 LKN 200
            +N
Sbjct: 646 SRN 648


>AF287292-1|AAG00999.1|  729|Drosophila melanogaster Disco-related
           protein protein.
          Length = 729

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = -3

Query: 402 LNI*TEVKLRPATKLETIHLSNRPPFPQKEIYSSSEHS*SPVKQT 268
           +NI   V+      LE   L  R P P+ EI    EH   P  +T
Sbjct: 385 ININNSVRRESDNGLEASELEEREPEPETEIEPEHEHEHEPEPET 429


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,405,087
Number of Sequences: 53049
Number of extensions: 411282
Number of successful extensions: 718
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)