Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310F04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   6.6  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 236 FGHQLTPVVGASFVLVT 186
           FGH L  + G SF+LVT
Sbjct: 872 FGHGLLLMFGISFLLVT 888


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -1

Query: 242 VKFGHQLTPVVGASFVLVTVINKISR*IQFIIYC 141
           VK+G  L P + +  ++ T I++       + YC
Sbjct: 116 VKYGQTLGPYLSSYVLMATAIDRHQAICYPLTYC 149


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 479 DIIYYEKCIILHCS 520
           D +YYE    +HCS
Sbjct: 83  DWVYYESRAHIHCS 96


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 461 FRLTIPQYLFIETGFLTF 408
           F  TIP YLF E+  + F
Sbjct: 437 FHDTIPPYLFFESPPVVF 454


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 461 FRLTIPQYLFIETGFLTF 408
           F  TIP YLF E+  + F
Sbjct: 437 FHDTIPPYLFFESPPVVF 454


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 461 FRLTIPQYLFIETGFLTF 408
           F  TIP YLF E+  + F
Sbjct: 437 FHDTIPPYLFFESPPVVF 454


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 461 FRLTIPQYLFIETGFLTF 408
           F  TIP YLF E+  + F
Sbjct: 437 FHDTIPPYLFFESPPVVF 454


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 63  RPLIPAYLRLHSKSNQSNKYVPKM 134
           +P++P Y  +  K N     VPK+
Sbjct: 191 QPVLPTYKWMQVKRNVPKPTVPKI 214


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 63  RPLIPAYLRLHSKSNQSNKYVPKM 134
           +P++P Y  +  K N     VPK+
Sbjct: 191 QPVLPTYKWMQVKRNVPKPTVPKI 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,035
Number of Sequences: 336
Number of extensions: 2812
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)