BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310F01f (521 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-... 27 0.50 AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 2.7 AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 4.7 AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal prot... 23 4.7 AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 8.2 >AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-A-gated chloride channelprotein. Length = 459 Score = 26.6 bits (56), Expect = 0.50 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +3 Query: 78 TGKLLLSDK-PTIIITL*GKYTSKVWRPTRFLCS 176 TG++++ D +ITL G + K+W P F + Sbjct: 73 TGEIMIEDDGANDVITLSGDFAEKIWVPDTFFAN 106 >AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing phosphoprotein protein. Length = 1200 Score = 24.2 bits (50), Expect = 2.7 Identities = 15/47 (31%), Positives = 19/47 (40%) Frame = +1 Query: 127 EESTRAKCGGQRDSFVQEGAGGILRIPSAGAEDQGHRYKGPREWLGR 267 +E R GG DS +EG G R + Q R K E L + Sbjct: 958 KEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDEGLSQ 1004 >AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. Length = 3320 Score = 23.4 bits (48), Expect = 4.7 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = -2 Query: 151 HTLLVYFPHNVIIIVGLSDNN 89 H L FPHN I+G+++++ Sbjct: 3094 HGLSYVFPHNTSNIIGITEDH 3114 >AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal protein rpL7a protein. Length = 271 Score = 23.4 bits (48), Expect = 4.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = +2 Query: 167 PLFKRVQEVFFEFPQPEQKIKGIAIKDLENGLAEPSITRGGLGFN 301 P+ K+V P P K K + +K + N L E + G+G N Sbjct: 6 PVKKKVVPKQKVAPAPLAKPKKVEVKKVVNPLFEKRVKNYGIGQN 50 >AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. Length = 615 Score = 22.6 bits (46), Expect = 8.2 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -2 Query: 427 KTKTYKQFARLQLISQTLFSRVYFDNKL 344 K + Y F ++ Q L SRV NKL Sbjct: 532 KREHYHDFKEADVLPQHLLSRVPIHNKL 559 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 482,845 Number of Sequences: 2352 Number of extensions: 8937 Number of successful extensions: 17 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 47783067 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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