Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310F01f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF343404-1|AAK51400.1|  105|Homo sapiens psoriasis vulgaris immu...    31   3.2  
DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein.       29   7.5  
AY727870-1|AAU20329.2| 1113|Homo sapiens ARID2 protein.                29   7.5  
AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein pr...    29   7.5  

>AF343404-1|AAK51400.1|  105|Homo sapiens psoriasis vulgaris
           immunoglobulin heavy chain protein.
          Length = 105

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 130 ESTRAKCGGQRDSFVQEGAGGILRIPSAGAEDQGHRYKG 246
           ES +  C G R SF     G + R+P  G E  G  Y G
Sbjct: 5   ESLKISCQGSRYSFSSYWIGWVRRVPGKGLEWMGFIYPG 43


>DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein.
          Length = 1835

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
 Frame = +1

Query: 223 DQGHRYKGPR-EWLGRAVDHP-RRIGL*LRQHQTEER*RIRLQVCYRNIRVRIVSVKLVE 396
           D+   ++G   EW+  ++ HP R++G+    +  E +  +++ V  RN+     +VKL+ 
Sbjct: 252 DRNKSHEGTSGEWIWESLFHPPRKLGI----NDIEGQRVLQIAVILRNLSFEEGNVKLLA 307

Query: 397 AARIVYKFLFL---IHCKQIXEIFIKLLNNV 480
           A R   +FL L    H   + ++ +  L N+
Sbjct: 308 ANRTCLRFLLLSAHSHFISLRQLGLDTLGNI 338


>AY727870-1|AAU20329.2| 1113|Homo sapiens ARID2 protein.
          Length = 1113

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
 Frame = +1

Query: 223 DQGHRYKGPR-EWLGRAVDHP-RRIGL*LRQHQTEER*RIRLQVCYRNIRVRIVSVKLVE 396
           D+   ++G   EW+  ++ HP R++G+    +  E +  +++ V  RN+     +VKL+ 
Sbjct: 252 DRNKSHEGTSGEWIWESLFHPPRKLGI----NDIEGQRVLQIAVILRNLSFEEGNVKLLA 307

Query: 397 AARIVYKFLFL---IHCKQIXEIFIKLLNNV 480
           A R   +FL L    H   + ++ +  L N+
Sbjct: 308 ANRTCLRFLLLSAHSHFISLRQLGLDTLGNI 338


>AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein
           protein.
          Length = 1686

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
 Frame = +1

Query: 223 DQGHRYKGPR-EWLGRAVDHP-RRIGL*LRQHQTEER*RIRLQVCYRNIRVRIVSVKLVE 396
           D+   ++G   EW+  ++ HP R++G+    +  E +  +++ V  RN+     +VKL+ 
Sbjct: 103 DRNKSHEGTSGEWIWESLFHPPRKLGI----NDIEGQRVLQIAVILRNLSFEEGNVKLLA 158

Query: 397 AARIVYKFLFL---IHCKQIXEIFIKLLNNV 480
           A R   +FL L    H   + ++ +  L N+
Sbjct: 159 ANRTCLRFLLLSAHSHFISLRQLGLDTLGNI 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,299,910
Number of Sequences: 237096
Number of extensions: 1317108
Number of successful extensions: 2966
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2966
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)