Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310E09f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_40251| Best HMM Match : Notch (HMM E-Value=9.4) 30 1.3
SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06) 30 1.3
SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0) 29 1.8
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 29 2.3
SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05) 29 2.3
SB_59421| Best HMM Match : RVT_1 (HMM E-Value=0.18) 29 3.1
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_55545| Best HMM Match : RVT_1 (HMM E-Value=0.052) 29 3.1
SB_40863| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 29 3.1
SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037) 29 3.1
SB_8231| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_46869| Best HMM Match : RnaseH (HMM E-Value=0.69) 29 3.1
SB_37802| Best HMM Match : RnaseH (HMM E-Value=0.69) 29 3.1
SB_23176| Best HMM Match : RnaseH (HMM E-Value=0.69) 29 3.1
SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59) 29 3.1
SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014) 29 3.1
SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62) 28 4.1
SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019) 28 4.1
SB_48248| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_41439| Best HMM Match : SWIM (HMM E-Value=0.088) 28 5.4
SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10) 28 5.4
SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0) 28 5.4
SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_10695| Best HMM Match : Pollen_Ole_e_I (HMM E-Value=5.2) 27 7.1
SB_48103| Best HMM Match : Lectin_C (HMM E-Value=5.2e-36) 27 9.4
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 27 9.4
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_46098| Best HMM Match : RnaseH (HMM E-Value=0.089) 27 9.4
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 27 9.4
SB_22365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_20444| Best HMM Match : F-box (HMM E-Value=5.2) 27 9.4
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 151 FYQGHNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPY 330
++ G Y++S A+ K W++ R+ CR+ DLVS+ T EN +F I+ +
Sbjct: 1446 YWGGLCYYFSNATT--ADLKT-WMEARDFCRKSRGDLVSLRTANENAFVFSEIKTRYYYW 1502
Query: 331 -IWTSGRLCDFKGCETRKDLEPKNILGW 411
+W +G T D P + + W
Sbjct: 1503 TVWIGLNDLGTEGVNTWSDGSPMSYINW 1530
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 217 WLDGRNICREYCMDLVSMETQEENNLIFKLIQ 312
W + R C+ DLVSMET+EE + I K IQ
Sbjct: 370 WTENREKCKSRNGDLVSMETEEEWSFINKKIQ 401
>SB_24278| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 363
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +1
Query: 133 NRPKEFFYQGHNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQ 312
NR + +++ H Y L + K+ W D +CRE L+++ E +I K I+
Sbjct: 252 NRCPQGWFEAHKVCYG-----LYHEKMYWRDAMTLCREQGAGLLTVRDANEMEVIRKHIK 306
Query: 313 QNDVPYIWTSGRLCDFKG 366
+ ++ + W R G
Sbjct: 307 EKNL-FFWLGARYSHVNG 323
>SB_40251| Best HMM Match : Notch (HMM E-Value=9.4)
Length = 112
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKNILGWFWSANREKIS-PTNQIPNRW----GYNPWSQTGHKK 504
C+F+ C RK NI+G W A R+ T + W G P + TG K
Sbjct: 51 CNFEKCTGRKCRNGDNIMGCLWKAGRKVYDWRTRRTQREWEFIKGQTPSTYTGPMK 106
>SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06)
Length = 583
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 169 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLI 297
Y+Y+G ++ + W G+ C + DL + +EEN I
Sbjct: 99 YYYNGKCYHYSSFEETWTQGQRYCLDQDADLAIINDREENEFI 141
>SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 211 VDWLDGRNICREYCMDLVSMETQEENNLIFKL 306
++W D R C + DLV + +++EN +++L
Sbjct: 24 MNWADARTACGKLGGDLVKITSEQENTFVYEL 55
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 196 LANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQ 312
L + W +GR C+ DLVS+ET E + + L++
Sbjct: 864 LVTKGESWAEGRKTCQSKGGDLVSIETDGEWSYVKSLVE 902
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 211 VDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVP 327
+ WL R C DLV MET+EE I + IQ VP
Sbjct: 197 MSWLLSRQQCSVAGGDLVVMETKEEWAFITEQIQTKTVP 235
>SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0)
Length = 1182
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 205 RKVDWLDGRNICREYCMDLVSMETQEENNLIFKL 306
R++ W D R C + DLV + ++EEN ++ L
Sbjct: 133 REMAWNDARAACGDMGGDLVQIASKEENEFVYGL 166
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +1
Query: 160 GHNY-FYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYIW 336
G N+ F++G+ +N + W + C LVS+ EEN +F + QQ++ W
Sbjct: 621 GENWRFFNGYCYLTSNTCLSWKQSESACAVLGSGLVSVHNHEEN--VF-IQQQHNGEKSW 677
Query: 337 TSGRLCDFKGCETRKDLEPKNILGW 411
+G D P N W
Sbjct: 678 VGLSDVTSEGRFVWADGSPTNFTNW 702
>SB_31799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 960
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 217 WLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVP 327
WL R C DLV MET+EE I + IQ VP
Sbjct: 357 WLLSRQQCSVAGGDLVVMETKEEWAFITEQIQTKTVP 393
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = +1
Query: 172 FYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYIWTSGRL 351
+Y G+ + +N + W + C LVS+ EEN +F + QQ++ W
Sbjct: 600 YYKGYCYKTSNTCLTWKRAESACAVMSSGLVSVHNHEEN--VF-IQQQHNGEKSWVGLSD 656
Query: 352 CDFKGCETRKDLEPKNILGW 411
+G D P N W
Sbjct: 657 VTTEGQFVWADGSPTNFTNW 676
>SB_7745| Best HMM Match : Lectin_C (HMM E-Value=4.2e-05)
Length = 322
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 217 WLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVP 327
WL R C DLV MET+EE I + IQ VP
Sbjct: 203 WLLSRQQCSVAGGDLVVMETKEEWAFITEQIQTKTVP 239
>SB_59421| Best HMM Match : RVT_1 (HMM E-Value=0.18)
Length = 484
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 252 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 284
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 781 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 813
>SB_55545| Best HMM Match : RVT_1 (HMM E-Value=0.052)
Length = 381
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 140 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 172
>SB_40863| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1236
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 420 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 452
>SB_23813| Best HMM Match : RVT_1 (HMM E-Value=0.00037)
Length = 1283
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 683 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 715
>SB_8231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 58 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 90
>SB_4263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1586
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 844 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 876
>SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 453 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 485
>SB_46869| Best HMM Match : RnaseH (HMM E-Value=0.69)
Length = 431
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 13 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 45
>SB_37802| Best HMM Match : RnaseH (HMM E-Value=0.69)
Length = 756
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 58 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 90
>SB_23176| Best HMM Match : RnaseH (HMM E-Value=0.69)
Length = 377
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 58 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 90
>SB_22383| Best HMM Match : Herpes_BLRF2 (HMM E-Value=0.59)
Length = 810
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 337 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 369
>SB_20170| Best HMM Match : RVT_1 (HMM E-Value=0.00014)
Length = 1212
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 352 CDFKGCETRKDLEPKN--ILGWFWSANREKISP 444
C+ + ++ + PK ILGW WSA K SP
Sbjct: 792 CNLRLSASKTIINPKTTTILGWIWSAGTLKASP 824
>SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62)
Length = 331
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 279 GRKQSDLQAHPAERCSLHLDIGTSMRLQGM*NAKRSRTQEHSR 407
G+++S + A + H+D TS +G +K+ R Q HS+
Sbjct: 127 GQRKSQIPTWTAPEPNPHVDSATSRNPRGQRQSKKPRGQRHSK 169
>SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019)
Length = 348
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 279 GRKQSDLQAHPAERCSLHLDIGTSMRLQGM*NAKRSRTQEHSR 407
G+++S + A + H+D TS +G +K+ R Q HS+
Sbjct: 284 GQRKSQIPTWTAPEPNPHVDSATSRNPRGQRQSKKPRGQRHSK 326
>SB_48248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 421 ANREKISPTNQIPNRWGYNPWSQT 492
A E+ SPTN+ NRW PW+ +
Sbjct: 114 AREEQASPTNEHSNRW-IKPWTDS 136
>SB_41439| Best HMM Match : SWIM (HMM E-Value=0.088)
Length = 921
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +1
Query: 256 DLVSMETQEENNLIFKLIQQNDVPYIWTSGRLCDFKGCETRKDLEPKNILGWFWSANR 429
DL ++ NN +FK+ + +T CE KD P FWSAN+
Sbjct: 633 DLYLSTVEKFNNDVFKVRSSSKNNESYTVDMTLGMCSCEVAKDGSPCKHQYVFWSANK 690
>SB_3713| Best HMM Match : Lectin_C (HMM E-Value=6.6e-10)
Length = 202
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 208 KVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQN-DVPYIWTSGRLCDFKGCETRKD 384
K W D R+ CR +L S+ T E+ L+ L+ + D +W + +G D
Sbjct: 120 KKTWPDARDSCRAQGAELASIHTGWESALVTSLLVTSWDAGDVWIGLTDTNQRGIYRWTD 179
Query: 385 LEPKNILGWF 414
P + W+
Sbjct: 180 GSPVDWTNWW 189
>SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2021
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 127 IYAQREATGNDRASVRSREPTTQLRKPPPT 38
I+ R A +R+ VRSR +R PPT
Sbjct: 1552 IHTIRRANSKNRSMVRSRRSLADMRSTPPT 1581
>SB_9329| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 577
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +1
Query: 208 KVDWLDGRNICREYCMDLVSMETQEENN-LIFKLIQQNDVPYIWTSGRLCDFKGCETRKD 384
++ W R C+ DLVS+ +Q+E + LI+++ N + +IWT + D
Sbjct: 318 RLTWPQARLRCQREGGDLVSILSQQEKDFLIYQMKTVNGI-WIWTGLNDRSVERGYEWSD 376
Query: 385 LEPKNILGWFWSANREKISPTNQIPNRWGYNPWSQTGHKKQR 510
P + W + + N + + W+ ++R
Sbjct: 377 GSPVSFTSWLYGQPNDHWGRDNCVAVQTRMGSWNDVNCMQRR 418
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 208 KVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYIWT 339
K+ W + R +C++ DLVS+ + E + + + N V +WT
Sbjct: 174 KLPWSEAREVCKKEGGDLVSIHSAFEQAFLLRNM-INFVGNVWT 216
>SB_8855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 217 WLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYIWTSGRL-CDFKGCETRKDLEP 393
W + C E+ LV+ T+EEN ++K + +I L C+ +DL+
Sbjct: 85 WNLAKQACEEFNAHLVTFTTKEENQAVYKKLAVGKSLWIGLKSSLNSKIYQCQPVEDLDY 144
Query: 394 K 396
K
Sbjct: 145 K 145
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 334 KCREHRSAG*A*RS-DCFLPGSP*RRGPCSIHGKC 233
KC+ + +AG A +C LPG P R G C+ +G C
Sbjct: 1534 KCKCNEAAGDAYVGVNCELPGCPGRDGNCNGNGFC 1568
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 71 FSRPHRSPVVSCRFPLRINVLTDQRNSFTKDTTTSTAVTFP 193
F++ HR + +C F +++N LT +F + S T P
Sbjct: 1443 FNKDHREDLENCDFAMKVNKLTISLMAFFLENALSDVSTPP 1483
>SB_10695| Best HMM Match : Pollen_Ole_e_I (HMM E-Value=5.2)
Length = 300
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 367 CETRKDLEPKNILGWFWS-ANREKISPTNQIPNRWGYNPWSQTGHKKQRXP 516
CE +K++E K L W + ++ + T +PNR+G + K + P
Sbjct: 58 CEKKKNIEKKRALAWDRTRPKKQNGNHTYGLPNRYGSTRLLRKAVKNPKAP 108
>SB_48103| Best HMM Match : Lectin_C (HMM E-Value=5.2e-36)
Length = 137
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/50 (24%), Positives = 29/50 (58%)
Frame = +1
Query: 151 FYQGHNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIF 300
+ ++Y+ +G +L +R+ W D R C++ +L+S+++ EN ++
Sbjct: 11 YTSANDYWTTGD--DLVSRQT-WQDARAACQQAGAELISIQSAAENAFVY 57
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 118 QREATGNDRASVRSREPTTQLRKPPPTT 35
QR G+DR+ R+ + + +KPPP T
Sbjct: 1786 QRWLPGSDRSECRTSQGLSYTQKPPPPT 1813
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 353 ATSRDVKREKISNPRTFSAGSGPLTEKRSRPLI 451
+T ++V+R+K S+P + S G G ++ S P +
Sbjct: 400 STDKEVQRDKNSSPSSGSGGEGRSSQSPSTPSV 432
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 280 EENNLIFKLIQQNDVPYIWTSGRLCDFKGCETRKDLEPKNILGWFWSANREKIS 441
EE + KLI++ W + RL F E +DLE + ++ +F+ + K++
Sbjct: 9 EEREYLLKLIEE------WNASRLDIFAISEPTEDLEYRGVMRFFFQDSGSKVA 56
>SB_46098| Best HMM Match : RnaseH (HMM E-Value=0.089)
Length = 822
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 319 DVPYIWTSGRLCDFKGCETRKDLEPKNILGWFWSANREKISP 444
DV Y W RL +T D + +LGW WS+ K SP
Sbjct: 369 DVLYKWNL-RL---SAAKTVIDPQSTTVLGWIWSSGTLKASP 406
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 410 GSGPLTEKRSRPLIRYRTVGATTLGLRPGTRSSA 511
G+GP +R+RP++R R VG RP R A
Sbjct: 1810 GTGP---QRARPVVRPRVVGHVVPSFRPSHRGIA 1840
>SB_22365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 204 PESRLVGRTQHLP*ILHGPRLYGDPGRKQSDLQAHPAERCSLHLD 338
P+ GR LP I YG+PGR +HP ER S +D
Sbjct: 58 PKDSKPGRFYTLPKI----HKYGNPGRPIISSNSHPTERISEFVD 98
>SB_20444| Best HMM Match : F-box (HMM E-Value=5.2)
Length = 332
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 356 SHRRPDVQM*GTSFCWMSLKIRLFSSWVSIETR 258
SHR PD+Q W++ K R+ S+ S+ R
Sbjct: 143 SHRHPDLQTPYKQKAWLASKYRMLSNIKSLRRR 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,531,463
Number of Sequences: 59808
Number of extensions: 389382
Number of successful extensions: 1209
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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