Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310E09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical pr... 34 0.071
AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin... 34 0.071
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 31 0.50
Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 31 0.66
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 30 0.87
U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 30 1.2
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF077540-3|AAC26312.2| 421|Caenorhabditis elegans C-type lectin... 29 2.0
Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical p... 29 2.7
AL110484-4|CAB54396.2| 425|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81542-12|CAB04422.2| 363|Caenorhabditis elegans Hypothetical p... 28 4.7
AL023821-3|CAA19439.2| 363|Caenorhabditis elegans Hypothetical ... 28 4.7
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 28 4.7
Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical ... 27 6.2
AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin... 27 6.2
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 27 6.2
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 27 8.1
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 27 8.1
AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical ... 27 8.1
>U42843-4|AAA83595.1| 178|Caenorhabditis elegans Hypothetical
protein T19E7.1 protein.
Length = 178
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 175 YSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDV 324
Y H ++ V W+ N+CR LVS++ + EN + KL ++N++
Sbjct: 57 YEDHWYKMFETDVMWIPAENVCRSMGGHLVSIKDESENLFVHKLRKKNNI 106
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 175 YSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYI 333
Y+G+ + + D ++ C++ C +LVS+ + EENN + L N YI
Sbjct: 172 YNGNCYYPSQSALSEQDAQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224
>Z81542-6|CAE17834.1| 365|Caenorhabditis elegans Hypothetical
protein F49A5.9 protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.071
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 232 NICREYC-MDLVSMETQEENNLIFKLIQQNDVPYIWTSGRLC 354
++C Y L S+ ++ENN IF + + V Y WT G +C
Sbjct: 130 SVCMSYGGSTLFSIRNEQENNAIFDFVSNSSVDYFWT-GLIC 170
>AF077540-5|AAC26308.1| 417|Caenorhabditis elegans C-type lectin
protein 20 protein.
Length = 417
Score = 33.9 bits (74), Expect = 0.071
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +1
Query: 163 HNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEEN---NLIFKLIQQNDVPYI 333
HNY S ++P +A+ ++ + C E C LVS+ + EN N++ QN+ +I
Sbjct: 156 HNYNGSCYIPHVAS---SFIRAQRTCEEECGSLVSIHSANENRYFNILASTFAQNEQVFI 212
Query: 334 ---WT-SGR 348
WT SGR
Sbjct: 213 GGMWTLSGR 221
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 175 YSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDV 324
Y+G + +D D R +C+ DLVS+ +Q EN + L+ V
Sbjct: 331 YNGFCYSVNTNLLDEPDARQVCQRVSGDLVSIHSQAENLFLQSLVNSTGV 380
>Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical
protein F49A5.7 protein.
Length = 411
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 241 REYCMDLVSMETQEENNLIFKLIQQNDVPYIWTSGRLCD 357
RE L S+ ++ENN + + V YIWT G +C+
Sbjct: 178 REGGSTLFSIRNEQENNATLDFVSNSGVAYIWT-GLICN 215
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 180 AVEVVVSLVKEFLWSVSTFMRNGKRQETTGLLCGRENRQRSYES 49
AV +VS+ K + TF+RNG+ + + G +QR +ES
Sbjct: 608 AVGALVSITKVSRSELETFVRNGESTQKIADIYGTPEQQRQFES 651
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 223 DGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYI 333
D + C++ C +LVS+ + EENN + L N YI
Sbjct: 181 DAQFSCQQACGNLVSIHSIEENNYVQSLFTTNAPTYI 217
>U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin
protein 5 protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 169 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLI 309
Y Y+GH L + ++ + IC + C +L S+ + EN + ++
Sbjct: 161 YNYNGHCFTLHTERNTFVQAQAICEQECGNLASIHSSNENRYLSSIM 207
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 169 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQ 312
Y Y+G+ + + ++ +N C ++C DL ++ T EN I + Q
Sbjct: 163 YNYNGYCYDYY-AEASFVVAQNTCEQFCGDLATIHTANENRYILTVAQ 209
>AF077540-3|AAC26312.2| 421|Caenorhabditis elegans C-type lectin
protein 21 protein.
Length = 421
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 238 CREYCMDLVSMETQEENNLIFKLIQQNDVP--YIWTSGRLCDF 360
C E C +LVS+ + E NL ++ N +P YI+ G + DF
Sbjct: 186 CEEECGNLVSIHSANE-NLYLNILAYNFLPGEYIYIGGMVQDF 227
>Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical
protein Y48E1B.16 protein.
Length = 347
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/53 (20%), Positives = 25/53 (47%)
Frame = +1
Query: 178 SGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYIW 336
SG ++ +++W D + C E L ++++ +N LI ++ +W
Sbjct: 236 SGTKYKIFEERMNWNDAQLHCEELGSHLAYLDSESKNTYATSLIDSQNISMVW 288
>AL110484-4|CAB54396.2| 425|Caenorhabditis elegans Hypothetical
protein Y38E10A.5 protein.
Length = 425
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 169 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLI 297
Y Y+G N + G+ IC + C +L S+ + EN I
Sbjct: 164 YNYNGFCYTFHNTASTYTKGQKICEQECGNLASIHSANENRYI 206
>Z81542-12|CAB04422.2| 363|Caenorhabditis elegans Hypothetical
protein Y102A5B.1 protein.
Length = 363
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 259 LVSMETQEENNLIFKLIQQNDVPYIWTSGRLCDFKG 366
L S+ + +EN + ++ +V +WT G +CD G
Sbjct: 145 LFSIRSDQENQAVLDFVKNENVDNLWT-GLICDDHG 179
>AL023821-3|CAA19439.2| 363|Caenorhabditis elegans Hypothetical
protein Y102A5B.1 protein.
Length = 363
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 259 LVSMETQEENNLIFKLIQQNDVPYIWTSGRLCDFKG 366
L S+ + +EN + ++ +V +WT G +CD G
Sbjct: 145 LFSIRSDQENQAVLDFVKNENVDNLWT-GLICDDHG 179
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 223 DGRNICREYCMDLVSMETQEENNLIFKLI 309
D R C DLVS+ +Q EN+ I LI
Sbjct: 280 DAREFCLSLSEDLVSIHSQAENDFIQSLI 308
>Z81542-1|CAB04414.1| 379|Caenorhabditis elegans Hypothetical
protein F49A5.2 protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 259 LVSMETQEENNLIFKLIQQNDVPYIWT 339
LVS++ ++ENN I + + V +WT
Sbjct: 146 LVSIKNEQENNAILNFVPNSAVENLWT 172
>AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.3 protein.
Length = 355
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 259 LVSMETQEENNLIFKLIQQNDVPYIWTSGRLC 354
L S+ ++EN+ I +N++ IWT G LC
Sbjct: 133 LFSIRNEQENSAILDFASKNNIGNIWT-GLLC 163
>AF025452-1|AAB70944.1| 411|Caenorhabditis elegans C-type lectin
protein 2 protein.
Length = 411
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 151 FYQGHNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKL 306
+Y +NY Y+ H + + IC E C +LVS+ + EN + +
Sbjct: 155 YYNYNNYCYTFH-----RDLYSFTTAQTICEEECGNLVSIHSANENRYVMTI 201
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 169 YFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKL 306
Y Y+ + ++ + + + IC E C +LVS+ + EN + +
Sbjct: 154 YNYNNYCYTFSHNQSSFTTAQAICEEECGNLVSIHSANENRYLMNI 199
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 340 MSKCREHRSAG*A*RSDCFLPGSP*RRGPCSIHGKCCVRP 221
++ C+E + R +C GSP + C G C V+P
Sbjct: 346 LAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKP 385
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 340 MSKCREHRSAG*A*RSDCFLPGSP*RRGPCSIHGKCCVRP 221
++ C+E + R +C GSP + C G C V+P
Sbjct: 354 LAACKEQKDILVWKRGNCDEAGSPCEKMECGFWGSCVVKP 393
>AL023821-1|CAA19438.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.2 protein.
Length = 355
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 223 DGRNICREYCMDLVSMETQEENNLIFKL 306
D + IC+ C +LVS+ + EN I L
Sbjct: 252 DAQEICKTRCANLVSISSANENRFIRSL 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,679,651
Number of Sequences: 27780
Number of extensions: 278502
Number of successful extensions: 850
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -