Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310E08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z83123-4|CAB05608.1|  316|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z83123-1|CAB05607.1|  316|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U58748-5|AAP31419.1|  285|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U58748-4|AAB52967.1|  522|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL132949-10|CAB61082.1|  721|Caenorhabditis elegans Hypothetical...    27   8.1  
AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily a...    27   8.1  

>Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical
           protein C34B4.5 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 287 LFTTPTLEYWLLRVSIKPTFPSIFLAYVNC 198
           +F +P +  WL+ + + P+   IFL   NC
Sbjct: 157 IFESPYIYIWLVMIYVLPSLTLIFLGQDNC 186


>Z49072-5|CAA88885.2| 1109|Caenorhabditis elegans Hypothetical
           protein C44F1.5 protein.
          Length = 1109

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = -1

Query: 317 PNLNGMLNWSLFTTPTLEYWLLRVSIKPTFPSIFLAYVNCTSLIMF 180
           PN   +   + F+T +   W +  ++   FPS++LA +   SL+ +
Sbjct: 440 PNAPDVCQKAHFSTYSFAMWTITTAVFVRFPSVYLAILLIISLLTY 485


>Z49067-4|CAA88853.2| 1109|Caenorhabditis elegans Hypothetical
           protein C44F1.5 protein.
          Length = 1109

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = -1

Query: 317 PNLNGMLNWSLFTTPTLEYWLLRVSIKPTFPSIFLAYVNCTSLIMF 180
           PN   +   + F+T +   W +  ++   FPS++LA +   SL+ +
Sbjct: 440 PNAPDVCQKAHFSTYSFAMWTITTAVFVRFPSVYLAILLIISLLTY 485


>Z83123-4|CAB05608.1|  316|Caenorhabditis elegans Hypothetical
           protein T04A11.5 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 300 VKLEFIHNTYTGILVAKGIHKANVSVNIP 214
           V  E   +T +G+L+AK   K NV +N P
Sbjct: 98  VNKEIKFDTQSGVLIAKRDEKGNVEMNFP 126


>Z83123-1|CAB05607.1|  316|Caenorhabditis elegans Hypothetical
           protein T04A11.2 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 300 VKLEFIHNTYTGILVAKGIHKANVSVNIP 214
           V  E   +T +G+L+AK   K NV +N P
Sbjct: 98  VNKEIKFDTQSGVLIAKRDEKGNVEMNFP 126


>U58748-5|AAP31419.1|  285|Caenorhabditis elegans Hypothetical
           protein ZK180.3b protein.
          Length = 285

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 172 YEANMIKDVQFTYARNIDGNVGFMDTLSNQYSSVGVVN--KLQFNIPF 309
           Y +N I+     + +N D +   +DTLS     VGV+      F IP+
Sbjct: 142 YFSNTIRKESSVFNKNTDNHDDLVDTLSKVLHVVGVIGFVACTFGIPY 189


>U58748-4|AAB52967.1|  522|Caenorhabditis elegans Hypothetical
           protein ZK180.3a protein.
          Length = 522

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 172 YEANMIKDVQFTYARNIDGNVGFMDTLSNQYSSVGVVN--KLQFNIPF 309
           Y +N I+     + +N D +   +DTLS     VGV+      F IP+
Sbjct: 290 YFSNTIRKESSVFNKNTDNHDDLVDTLSKVLHVVGVIGFVACTFGIPY 337


>AL132949-10|CAB61082.1|  721|Caenorhabditis elegans Hypothetical
           protein Y53F4B.12 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 324 FDSEFERYVKLEFIHNTYTGILVA 253
           F S+ E ++K EF H  Y G+L A
Sbjct: 206 FHSDPENWIKAEFFHFGYQGVLYA 229


>AC024857-1|AAK31566.2|  869|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 305 protein.
          Length = 869

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 377 SWSGCRGSTLNFISPDLISIPNLNGMLNWS 288
           SWS C GS L     + + I + NG   WS
Sbjct: 119 SWSPCGGSALICYDDNFVLIGSANGQRVWS 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,976,294
Number of Sequences: 27780
Number of extensions: 250308
Number of successful extensions: 553
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)