Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310E07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   2.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.6  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   6.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 110 TASTGCWFVFKD 75
           TAST CW VF D
Sbjct: 529 TASTRCWEVFMD 540


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 194 TTTRASETGETVSVPRRLHGGRGSAAPLQRP 286
           TTT A+E      +P +  G + + AP +RP
Sbjct: 288 TTTDAAEFLAAQEIPGQNPGEKTNIAPRERP 318


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 243 LRGTDTVSPVSLAL 202
           LRG  T+SPV +AL
Sbjct: 112 LRGVPTLSPVGVAL 125


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 406 TWSSRRPSPGKGT 444
           +WS +RP  GK T
Sbjct: 530 SWSQKRPGAGKFT 542


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 327 IPSELSGQGVSVRVSLEDSRHEECPRHVVKPQAFAGK 437
           +PS  S   VS R   ED+  +    H+   QA   K
Sbjct: 3   LPSSASNPAVSERDPDEDNSEDSKDPHLTDQQASGHK 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,378
Number of Sequences: 336
Number of extensions: 1540
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)