BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310E04f (521 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_05_0183 - 23051159-23051295,23051705-23051809,23051904-230519... 39 0.003 11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 34 0.060 08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 31 0.42 05_06_0042 - 25131962-25132149,25132261-25132345,25132750-251327... 29 3.0 04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 28 4.0 11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 28 5.2 02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 28 5.2 11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 27 6.9 02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 27 6.9 11_06_0554 - 24930437-24930552,24930878-24931079,24931164-249312... 27 9.1 05_03_0003 - 7298555-7298841,7299199-7299386,7299484-7299683,729... 27 9.1 02_03_0182 + 16101861-16101955,16102226-16102372,16102465-161025... 27 9.1 >05_05_0183 - 23051159-23051295,23051705-23051809,23051904-23051962, 23052620-23052688,23052892-23053154,23053367-23053431, 23053510-23053735,23053824-23053839,23054231-23054420, 23055384-23055399 Length = 381 Score = 38.7 bits (86), Expect = 0.003 Identities = 26/93 (27%), Positives = 47/93 (50%) Frame = +2 Query: 236 KKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWE 415 K+ R ++ K+ K +++P K++ M+++W EYITE + P+ + Sbjct: 234 KRSKRHMSLKQHKKCGSFDLPETLRKFDLYKPMHEMWKEYITE---LTKSTPK------K 284 Query: 416 TLTLXLYKADYHGCMLTVVRSKCPSFISKTGIC 514 L+ L AD HG + V+ ++C S S G+C Sbjct: 285 QLSETLLSADLHGAL--VIVAECKSASSYQGVC 315 >11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895, 3611984-3612217,3614113-3614138,3614446-3614633, 3615707-3617670,3617938-3618423,3618527-3618894 Length = 2207 Score = 34.3 bits (75), Expect = 0.060 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 3/108 (2%) Frame = +2 Query: 50 VLHFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRK 229 +L + T D FN SI F + N+P +Q +D +L+ +L ++ M K Sbjct: 2106 LLEIFIRRRPTDDMFNDGL--SIAKFAELNLPDRVLQIVDPQLQQDLETCQETPMAIK-- 2161 Query: 230 PIKKKTRCLTRKEKKTL---RFYNIPRHSVKYEDVVQMNKIWLEYITE 364 KK T CL L + R+S+K E +++++IW Y+ E Sbjct: 2162 --KKLTDCLLSVLSIGLSCTKSSPSERNSMK-EVAIELHRIWDAYLRE 2206 >08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 Length = 440 Score = 31.5 bits (68), Expect = 0.42 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +2 Query: 200 KKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQMNKIW 346 KK+ ++K+K KKK + +K+KK LRF I + + E V +M +W Sbjct: 374 KKKKKKKKKKKKKKKKKKKKKKKKKKLRFVMIFFYQL-CETVEKMYLLW 421 >05_06_0042 - 25131962-25132149,25132261-25132345,25132750-25132797, 25133084-25133197,25133279-25133410,25134029-25134124, 25134771-25135005,25135054-25135322,25135408-25135491, 25136529-25136703,25138018-25138229 Length = 545 Score = 28.7 bits (61), Expect = 3.0 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +2 Query: 203 KRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYED 322 +R +Q P++++ L EKK + + RH + ED Sbjct: 76 ERKLQDAEVPVEEQNNILKHLEKKETEYMRLQRHKMGVED 115 >04_04_1098 + 30876785-30876835,30876846-30877171,30877396-30877418, 30877687-30879392 Length = 701 Score = 28.3 bits (60), Expect = 4.0 Identities = 21/88 (23%), Positives = 45/88 (51%) Frame = +2 Query: 5 DRKSYFDFNNLK*RRVLHFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELKT 184 +RK + D + V + E+++S + +++ + + ++ E +K +LK Sbjct: 572 ERKRHLDARASLAAQKKRSVTSSSESSESSDYSSSSDSESDVSSD--SREDRKSARQLKH 629 Query: 185 ELVFAKKRSMQQKRKPIKKKTRCLTRKE 268 + + KKRS +KRK ++K+ + RKE Sbjct: 630 DELERKKRSQDEKRKELEKQKQEEERKE 657 >11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415 Length = 126 Score = 27.9 bits (59), Expect = 5.2 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +2 Query: 170 SELKTELVFAKKRSMQQ-KRKPIKKKTRCLTRKEKK 274 +ELK L KK++ + K+KP KKK + +K+KK Sbjct: 34 AELKKILELRKKKAKAKVKKKPKKKKNKKAKKKKKK 69 >02_04_0516 + 23593088-23593116,23593209-23593336,23593527-23593714, 23593861-23593919,23594997-23595345,23596081-23596333, 23596404-23597476 Length = 692 Score = 27.9 bits (59), Expect = 5.2 Identities = 16/59 (27%), Positives = 30/59 (50%) Frame = +2 Query: 110 NSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLRF 286 + + N+ + N+ V K + K + KK+ ++K K KKK + +K+KK R+ Sbjct: 51 DDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRW 109 >11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 Length = 1125 Score = 27.5 bits (58), Expect = 6.9 Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +2 Query: 83 TDSFNQQAANSII-NFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLT 259 +DSF + + S+ + L+ + ++K+ S L+ ++ A+ ++ KRK +++ T+ Sbjct: 223 SDSFERLRSGSLCGDTLRLDGEGANIRKLLSTLRNKVGRAQLVQVEDKRKRVEEATKPCE 282 Query: 260 RKEKKTLRFYNIP 298 E KT+ +P Sbjct: 283 FHEVKTICILGLP 295 >02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-989673, 990244-990510,990840-992458,992571-993327,993560-995506 Length = 1727 Score = 27.5 bits (58), Expect = 6.9 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = +2 Query: 332 MNKIWLEYITE---VLAMDDGVPEPNSKNWETLTLXLYKADYHGCMLTV 469 + KI LE I +L +DD + + K WE L L + GCM+ V Sbjct: 506 LQKILLEKIRHKRFLLVLDDMWEDRDRKGWENLLAPLKCNEATGCMILV 554 >11_06_0554 - 24930437-24930552,24930878-24931079,24931164-24931269, 24931357-24931599,24932398-24932484,24932695-24932825, 24933177-24933183,24933695-24933789 Length = 328 Score = 27.1 bits (57), Expect = 9.1 Identities = 8/27 (29%), Positives = 16/27 (59%) Frame = +2 Query: 269 KKTLRFYNIPRHSVKYEDVVQMNKIWL 349 ++ L+ + +PRH V E++ K W+ Sbjct: 178 QQNLQIHRLPRHEVSLEEIADNGKKWM 204 >05_03_0003 - 7298555-7298841,7299199-7299386,7299484-7299683, 7299774-7300038,7302403-7302512 Length = 349 Score = 27.1 bits (57), Expect = 9.1 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = -1 Query: 326 LRPRTSRCVVEYCKIEVFFSLYESNIWFFS 237 +RP+T R EY + +++ N WF+S Sbjct: 157 VRPQTKRTYYEYTGLWHIYAILSMNAWFWS 186 >02_03_0182 + 16101861-16101955,16102226-16102372,16102465-16102515, 16102617-16102782,16103055-16103283,16104067-16104638 Length = 419 Score = 27.1 bits (57), Expect = 9.1 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +2 Query: 230 PIKKKTRCLTRKEKKTLRFYNIPRHSVKY 316 P +K+ RCLTRK+ N+P ++++ Sbjct: 96 PARKELRCLTRKDLVETLAKNLPAGTIRF 124 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,347,583 Number of Sequences: 37544 Number of extensions: 228701 Number of successful extensions: 699 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 664 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1142636160 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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