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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310E04f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0183 - 23051159-23051295,23051705-23051809,23051904-230519...    39   0.003
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361...    34   0.060
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119     31   0.42 
05_06_0042 - 25131962-25132149,25132261-25132345,25132750-251327...    29   3.0  
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774...    28   4.0  
11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415           28   5.2  
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    28   5.2  
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993     27   6.9  
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98...    27   6.9  
11_06_0554 - 24930437-24930552,24930878-24931079,24931164-249312...    27   9.1  
05_03_0003 - 7298555-7298841,7299199-7299386,7299484-7299683,729...    27   9.1  
02_03_0182 + 16101861-16101955,16102226-16102372,16102465-161025...    27   9.1  

>05_05_0183 -
           23051159-23051295,23051705-23051809,23051904-23051962,
           23052620-23052688,23052892-23053154,23053367-23053431,
           23053510-23053735,23053824-23053839,23054231-23054420,
           23055384-23055399
          Length = 381

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 26/93 (27%), Positives = 47/93 (50%)
 Frame = +2

Query: 236 KKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWE 415
           K+  R ++ K+ K    +++P    K++    M+++W EYITE   +    P+      +
Sbjct: 234 KRSKRHMSLKQHKKCGSFDLPETLRKFDLYKPMHEMWKEYITE---LTKSTPK------K 284

Query: 416 TLTLXLYKADYHGCMLTVVRSKCPSFISKTGIC 514
            L+  L  AD HG +  V+ ++C S  S  G+C
Sbjct: 285 QLSETLLSADLHGAL--VIVAECKSASSYQGVC 315


>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
            3611984-3612217,3614113-3614138,3614446-3614633,
            3615707-3617670,3617938-3618423,3618527-3618894
          Length = 2207

 Score = 34.3 bits (75), Expect = 0.060
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
 Frame = +2

Query: 50   VLHFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRK 229
            +L   +    T D FN     SI  F + N+P   +Q +D +L+ +L   ++  M  K  
Sbjct: 2106 LLEIFIRRRPTDDMFNDGL--SIAKFAELNLPDRVLQIVDPQLQQDLETCQETPMAIK-- 2161

Query: 230  PIKKKTRCLTRKEKKTL---RFYNIPRHSVKYEDVVQMNKIWLEYITE 364
              KK T CL       L   +     R+S+K E  +++++IW  Y+ E
Sbjct: 2162 --KKLTDCLLSVLSIGLSCTKSSPSERNSMK-EVAIELHRIWDAYLRE 2206


>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
          Length = 440

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +2

Query: 200 KKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQMNKIW 346
           KK+  ++K+K  KKK +   +K+KK LRF  I  + +  E V +M  +W
Sbjct: 374 KKKKKKKKKKKKKKKKKKKKKKKKKKLRFVMIFFYQL-CETVEKMYLLW 421


>05_06_0042 -
           25131962-25132149,25132261-25132345,25132750-25132797,
           25133084-25133197,25133279-25133410,25134029-25134124,
           25134771-25135005,25135054-25135322,25135408-25135491,
           25136529-25136703,25138018-25138229
          Length = 545

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 203 KRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYED 322
           +R +Q    P++++   L   EKK   +  + RH +  ED
Sbjct: 76  ERKLQDAEVPVEEQNNILKHLEKKETEYMRLQRHKMGVED 115


>04_04_1098 +
           30876785-30876835,30876846-30877171,30877396-30877418,
           30877687-30879392
          Length = 701

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 21/88 (23%), Positives = 45/88 (51%)
 Frame = +2

Query: 5   DRKSYFDFNNLK*RRVLHFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELKT 184
           +RK + D       +    V +  E+++S +  +++   + + ++    E +K   +LK 
Sbjct: 572 ERKRHLDARASLAAQKKRSVTSSSESSESSDYSSSSDSESDVSSD--SREDRKSARQLKH 629

Query: 185 ELVFAKKRSMQQKRKPIKKKTRCLTRKE 268
           + +  KKRS  +KRK ++K+ +   RKE
Sbjct: 630 DELERKKRSQDEKRKELEKQKQEEERKE 657


>11_01_0373 + 2826646-2826676,2827010-2827268,2828325-2828415
          Length = 126

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 170 SELKTELVFAKKRSMQQ-KRKPIKKKTRCLTRKEKK 274
           +ELK  L   KK++  + K+KP KKK +   +K+KK
Sbjct: 34  AELKKILELRKKKAKAKVKKKPKKKKNKKAKKKKKK 69


>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +2

Query: 110 NSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLRF 286
           + + N+ + N+    V K   + K +    KK+  ++K K  KKK +   +K+KK  R+
Sbjct: 51  DDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKKKRW 109


>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
          Length = 1125

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +2

Query: 83  TDSFNQQAANSII-NFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLT 259
           +DSF +  + S+  + L+ +     ++K+ S L+ ++  A+   ++ KRK +++ T+   
Sbjct: 223 SDSFERLRSGSLCGDTLRLDGEGANIRKLLSTLRNKVGRAQLVQVEDKRKRVEEATKPCE 282

Query: 260 RKEKKTLRFYNIP 298
             E KT+    +P
Sbjct: 283 FHEVKTICILGLP 295


>02_01_0137 +
           988442-988641,989088-989281,989369-989488,989594-989673,
           990244-990510,990840-992458,992571-993327,993560-995506
          Length = 1727

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +2

Query: 332 MNKIWLEYITE---VLAMDDGVPEPNSKNWETLTLXLYKADYHGCMLTV 469
           + KI LE I     +L +DD   + + K WE L   L   +  GCM+ V
Sbjct: 506 LQKILLEKIRHKRFLLVLDDMWEDRDRKGWENLLAPLKCNEATGCMILV 554


>11_06_0554 -
           24930437-24930552,24930878-24931079,24931164-24931269,
           24931357-24931599,24932398-24932484,24932695-24932825,
           24933177-24933183,24933695-24933789
          Length = 328

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 269 KKTLRFYNIPRHSVKYEDVVQMNKIWL 349
           ++ L+ + +PRH V  E++    K W+
Sbjct: 178 QQNLQIHRLPRHEVSLEEIADNGKKWM 204


>05_03_0003 -
           7298555-7298841,7299199-7299386,7299484-7299683,
           7299774-7300038,7302403-7302512
          Length = 349

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 326 LRPRTSRCVVEYCKIEVFFSLYESNIWFFS 237
           +RP+T R   EY  +   +++   N WF+S
Sbjct: 157 VRPQTKRTYYEYTGLWHIYAILSMNAWFWS 186


>02_03_0182 +
           16101861-16101955,16102226-16102372,16102465-16102515,
           16102617-16102782,16103055-16103283,16104067-16104638
          Length = 419

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 230 PIKKKTRCLTRKEKKTLRFYNIPRHSVKY 316
           P +K+ RCLTRK+       N+P  ++++
Sbjct: 96  PARKELRCLTRKDLVETLAKNLPAGTIRF 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,347,583
Number of Sequences: 37544
Number of extensions: 228701
Number of successful extensions: 699
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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