BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS310E04f (521 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25 SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3) 31 0.76 SB_47935| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_43236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 2.3 SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3 SB_26114| Best HMM Match : CPSase_L_D3 (HMM E-Value=1.8) 29 2.3 SB_30863| Best HMM Match : Lectin_C (HMM E-Value=2.6e-05) 29 3.1 SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89) 29 3.1 SB_9048| Best HMM Match : UPF0193 (HMM E-Value=0.38) 29 3.1 SB_35430| Best HMM Match : Vicilin_N (HMM E-Value=0.43) 28 4.1 SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4 SB_40384| Best HMM Match : Filament (HMM E-Value=0.76) 28 5.4 SB_22707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4 SB_16126| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4 SB_51045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4 SB_13308| Best HMM Match : MFS_1 (HMM E-Value=0.0008) 27 7.1 SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07) 27 7.1 SB_51415| Best HMM Match : zf-CCCH (HMM E-Value=1.1) 27 7.1 SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 SB_24227| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4 >SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 280 Score = 32.3 bits (70), Expect = 0.25 Identities = 22/68 (32%), Positives = 37/68 (54%) Frame = +2 Query: 86 DSFNQQAANSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRK 265 D+F +NS+ NFL +V + Q+ ++ FA+ R + +K +P +KT RK Sbjct: 118 DTFLTHDSNSL-NFLLVHVSNDYAQQ--GYFRS---FAEARKLPEKSRPSVRKTHNNGRK 171 Query: 266 EKKTLRFY 289 K+ +RFY Sbjct: 172 HKENVRFY 179 >SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3) Length = 529 Score = 30.7 bits (66), Expect = 0.76 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Frame = +2 Query: 149 NEVQKIDSELKTELV---FAKKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPR 301 + + K D +T LV + K+ + K +KKKT+ T+ +KKT F+ IPR Sbjct: 256 SRIPKDDRPARTSLVRSLISIKKQLGMGAKKMKKKTK--TKTKKKTSPFHTIPR 307 >SB_47935| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 344 Score = 29.9 bits (64), Expect = 1.3 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +2 Query: 344 WLEYITEVLAMDDGVPEPNSKNWETLT 424 WLE I E A+D VP P+S++WE T Sbjct: 170 WLEEIEE--AIDQCVPPPSSEDWELTT 194 >SB_43236| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 226 Score = 29.5 bits (63), Expect = 1.8 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +2 Query: 179 KTELVFAKKRSMQQKRKPIKKKTRCLTRKEK-KTLRFYNIPRH-SVKYEDVVQMNKIWLE 352 KTE+ K +QK+K + +++ ++ KEK K F + R + K K E Sbjct: 78 KTEMARKMKEYEKQKKKLLAEESEKISEKEKSKLASFLEMERRITTKPSKAFTATKTTAE 137 Query: 353 YITEVLAMDDGVP 391 T +++DD P Sbjct: 138 SSTATVSLDDAKP 150 >SB_812| Best HMM Match : FH2 (HMM E-Value=0) Length = 1430 Score = 29.1 bits (62), Expect = 2.3 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +2 Query: 131 KTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTR 262 K+ NE KI SE E ++R +QK+K K + R LTR Sbjct: 1235 KSRFSVNEFCKIISEFSLEYRTTRERVREQKKKREKLRERNLTR 1278 >SB_46217| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 882 Score = 29.1 bits (62), Expect = 2.3 Identities = 15/69 (21%), Positives = 31/69 (44%) Frame = +2 Query: 56 HFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPI 235 +FV+ + DS + ++N++K + V+K+ + E + + M KRK Sbjct: 800 YFVIVRKSIQDSVPKAIMAFLVNYVKERIQSELVEKLYKSERFETLLQESEHMHIKRKEA 859 Query: 236 KKKTRCLTR 262 + + L R Sbjct: 860 AEMLKALQR 868 >SB_26114| Best HMM Match : CPSase_L_D3 (HMM E-Value=1.8) Length = 382 Score = 29.1 bits (62), Expect = 2.3 Identities = 23/106 (21%), Positives = 48/106 (45%) Frame = +2 Query: 122 NFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPR 301 N K +VP +V ++ ++ EL+ ++ S++ + +K CLT +++ + Sbjct: 103 NSRKQHVPATQVATYNANVEAELLDEEESSVEWS--DVSQKPSCLTGEQESVSSTFGCGL 160 Query: 302 HSVKYEDVVQMNKIWLEYITEVLAMDDGVPEPNSKNWETLTLXLYK 439 S DV T + ++DG+ P+S+N + + YK Sbjct: 161 SSACVVDVGDEK-------TSICCVEDGLIVPSSRNSKVDIVKSYK 199 >SB_30863| Best HMM Match : Lectin_C (HMM E-Value=2.6e-05) Length = 421 Score = 28.7 bits (61), Expect = 3.1 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +2 Query: 137 NVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLT----RKEKKTLRFYNIP 298 +V +++ +SE+K ++ K+ K K + + + RKEKK + FYN+P Sbjct: 8 DVRIKNMEESNSEIKGQIEDLGKKRKHMKNKWNTSQAKSVNFETGRKEKKNIVFYNVP 65 >SB_15448| Best HMM Match : Utp11 (HMM E-Value=0.89) Length = 1328 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = +2 Query: 230 PIKKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQMNKIWLEYITEVL 370 P ++T T EK LR+Y + + E V M WL+++ ++ Sbjct: 118 PPLERTGSPTAAEKDILRYYYYIHNGIDTEHVAPMEDSWLDHVLSLV 164 >SB_9048| Best HMM Match : UPF0193 (HMM E-Value=0.38) Length = 663 Score = 28.7 bits (61), Expect = 3.1 Identities = 21/76 (27%), Positives = 39/76 (51%) Frame = +2 Query: 44 RRVLHFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQK 223 +++L+ +VN +E N ++ + L+ VP + D +L + A KRS ++ Sbjct: 121 QKILNLMVNQQEK----NIAEDDATLRSLEAKVPSS-----DLDLHKRISAASKRSTKRP 171 Query: 224 RKPIKKKTRCLTRKEK 271 R+P +KK T +EK Sbjct: 172 RRPQQKKPVLATVQEK 187 >SB_35430| Best HMM Match : Vicilin_N (HMM E-Value=0.43) Length = 238 Score = 28.3 bits (60), Expect = 4.1 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Frame = +2 Query: 131 KTNVPXNEVQKIDSEL--KTELVFAKKRSMQQKRKPIKKKTRCLTRKEKK 274 + N NE QK++SE K +++ AK ++++K+K +K + +EKK Sbjct: 105 RANNELNEKQKLESEYKRKMQVMEAKIATLRRKQKDSEKVSAMHDEREKK 154 >SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 671 Score = 27.9 bits (59), Expect = 5.4 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = +2 Query: 152 EVQKIDSELKTELVFAKKRS---MQQKRKPIKKKTRCLTRKEKKTL 280 E + I+ LKT K+RS ++K K IK+ C+T K+ K + Sbjct: 110 ETEHIEENLKTAEKTQKRRSFRMFKKKVKEIKEIDNCVTEKKNKEM 155 >SB_40384| Best HMM Match : Filament (HMM E-Value=0.76) Length = 563 Score = 27.9 bits (59), Expect = 5.4 Identities = 25/94 (26%), Positives = 38/94 (40%) Frame = +2 Query: 2 LDRKSYFDFNNLK*RRVLHFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELK 181 L+RK+ D + LK VL E N+Q A + ++ NV N Q K Sbjct: 188 LERKAVVDKDRLKKEMVLRLNQVAAEFRKVSNKQMAETTKRTIRENVSIN-AQLAKMSDK 246 Query: 182 TELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLR 283 T + + ++ K K K + L EK+ R Sbjct: 247 TMELIQENDELRAKEKKQKLQIDMLEHNEKELAR 280 >SB_22707| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1499 Score = 27.9 bits (59), Expect = 5.4 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Frame = +2 Query: 131 KTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSV 310 + NV + +K DSE ++ ++K++ +QKR K + L R E+ L + P + Sbjct: 1212 EANVDNSSDEKNDSENESIEQVSRKKTKRQKRAAKKAEEDFLYRTEQALLDTDHTPECAE 1271 Query: 311 KYEDVV---QMNKI-WLEYI 358 ++ +V N + WL+Y+ Sbjct: 1272 DFDRLVLSSPNNSVTWLQYM 1291 >SB_16126| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1056 Score = 27.9 bits (59), Expect = 5.4 Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Frame = +2 Query: 104 AANSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLR 283 A + + +F+ V N + L + + + ++ +K KK++C++ +EK+ + Sbjct: 657 AKDFVASFMSQTVQKNINSNTEETLHRQPLMLDRYQTRRNKKV--KKSKCMSAREKREKK 714 Query: 284 FYNI-PRH 304 Y+I P H Sbjct: 715 VYDIEPEH 722 >SB_51045| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = +2 Query: 182 TELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQMNKIWL 349 +E F K+R+ ++ RK K +C+ R+ + + F + R + DV W+ Sbjct: 280 SETAFTKRRTDRRLRKANNKSVKCVFRRNQASRFFDSGMRSMYELSDVTPSLDHWI 335 >SB_13308| Best HMM Match : MFS_1 (HMM E-Value=0.0008) Length = 700 Score = 27.5 bits (58), Expect = 7.1 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +2 Query: 167 DSELKTELVFAKKRSMQQKRKPIKKKTRC-LTRKEKKTLRFYNIPRHSVKYEDVVQMNK 340 + E++ V ++K S +K+ P KKK + KEKK + KY + V+ K Sbjct: 209 NKEMEDAKVQSEKESEIEKKNPNKKKAPMYINNKEKKEITHSGNSEEVKKYNEGVEKEK 267 >SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07) Length = 483 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = +2 Query: 398 NSKN---WETLTLXLYKADYHGCMLTVVRSKCP 487 N+KN W+ LT K GC ++++ S+CP Sbjct: 116 NAKNPLLWQKLTFEETKHLTLGCFMSIIESRCP 148 >SB_51415| Best HMM Match : zf-CCCH (HMM E-Value=1.1) Length = 332 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +2 Query: 200 KKRSMQQKRKPIKKKTRCLTRKEKKT-LRFYNIPRHSVKYED 322 K+R Q+K K I+KK +K++K ++ YN+ + K ED Sbjct: 130 KQRKRQEKFKKIEKKKAIREQKQQKAAIQRYNLRNTTRKCED 171 >SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1008 Score = 27.1 bits (57), Expect = 9.4 Identities = 19/70 (27%), Positives = 27/70 (38%) Frame = +2 Query: 131 KTNVPXNEVQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSV 310 K+N E QK + L E+ KKR + K R T+KE N P Sbjct: 900 KSNENIKEKQKSGNSLAFEITPPKKRKAEPKAASDTTPRRESTKKETVAFTIENSPPKKC 959 Query: 311 KYEDVVQMNK 340 K + +N+ Sbjct: 960 KVQRTRTINR 969 >SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 244 Score = 27.1 bits (57), Expect = 9.4 Identities = 24/107 (22%), Positives = 48/107 (44%) Frame = +2 Query: 155 VQKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQM 334 ++K + KT L K+S + + + +++ + E K+L + + + +Y + + Sbjct: 6 LKKQNDSNKTSLKMDNKKSKKPQMEKLRRARINDSLNELKSLVLEAMKKDASRYSKMEKA 65 Query: 335 NKIWLEYITEVLAMDDGVPEPNSKNWETLTLXLYKADYHGCMLTVVR 475 + LE + L PE SK + +L Y+A Y+ C V R Sbjct: 66 DI--LEMTVKYLR---SAPEKQSKISDPTSLAKYRAGYNECAAEVTR 107 >SB_24227| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 253 Score = 27.1 bits (57), Expect = 9.4 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = +2 Query: 47 RVLHFVVNMEETTDSFNQQAANSIINFLKTNVPXNEVQKIDSELKTELVFAKKRSM 214 ++ HF + +EE + Q ++ NF+K N+ N I S T AK ++ Sbjct: 117 KITHFALLIEEPEAHLHPQLQLNLFNFIKENIKENTQIFITSHSPTLTSKAKLENL 172 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,773,411 Number of Sequences: 59808 Number of extensions: 276468 Number of successful extensions: 801 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 654 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 765 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1172759136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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