Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310E04f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   2.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   3.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.7  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   6.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.2  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   8.2  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 230 PIKKKTRCLTRKEKKTLRFY 289
           P  +KT C  RK K  ++FY
Sbjct: 18  PSVRKTHCTGRKHKDNVKFY 37


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 158 QKIDSELKTELVFAKKRSMQQKRKPIKKKTRCLTRKEKKTLR 283
           QKID+ELK E++ + +RS++        K R L  + + T +
Sbjct: 388 QKIDTELKPEMM-SIERSIETIENVASNKLRILQTRFEGTYK 428


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 212  MQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYE 319
            M++  +P+    +      + T + Y +PRH+V Y+
Sbjct: 1088 MEKVDQPLGAGFKLAKYSYQDTFKVYEMPRHAVVYD 1123


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 359 TEVLAMDDGVPEPN 400
           T++L++D+  PEPN
Sbjct: 34  TDILSVDEPAPEPN 47


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 130 EEIND*ICSLLIE*ICRFLHVYNE 59
           EE ND  C+   E  CRF   YN+
Sbjct: 723 EERNDNKCTFFDEDDCRFEFSYND 746


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 200 KKRSMQQKRKPIKKKTRCLTRKEKKTLRFYNIPRHSVKYEDVVQ 331
           +K   QQ+R+ + K+   L RK+    + Y  P   V Y  + Q
Sbjct: 51  QKNLQQQRREQLNKEQHRLARKQPD--KIYVAPAAGVTYFTLYQ 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,212
Number of Sequences: 2352
Number of extensions: 10311
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)