Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D12f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    26   0.23 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.41 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   2.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   3.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   3.8  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -3

Query: 210 LFVKLITEMLTSKKHQKVTTILITTEYTNMLL*FSKYTVT 91
           LF+ +I +++ +K  Q+  T+L  T+  N+L  +SK  VT
Sbjct: 56  LFIVVILKLILAKYRQQDVTLLQITKAKNLL--YSKQIVT 93


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 160 SNYDFNYNRIYKHVAVILKIYGYISNLCYFKIFLYLMLDLMNNKY 26
           SNY F    + K V  I+ I   I +   +   +YL+LD + +KY
Sbjct: 113 SNYAFTRIILLKSVLEIVIIDIEIYSQFLYGFMIYLILDTIKSKY 157


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 130 YKHVAVILKIYGYISNLCYFKIFLYLMLDLMNNKYLNSP 14
           YK+  V     G +  + YF IF+ L +     +   SP
Sbjct: 27  YKNSNVNYSKIGIVQTVAYFVIFIILTIVFFEKRSALSP 65


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 237 IILWLTCIYLFVKLITEMLTSKKHQKVTT 151
           +IL  TCIYL    I  +LT      VT+
Sbjct: 37  VILGTTCIYLTSLYIWFILTQMTFSGVTS 65


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 237 IILWLTCIYLFVKLITEMLTSKKHQKVTT 151
           +IL  TCIYL    I  +LT      VT+
Sbjct: 37  VILGTTCIYLTSLYIWFILTQMTFSGVTS 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,777
Number of Sequences: 336
Number of extensions: 2259
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)