Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D11f
         (493 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338...    30   0.88 
05_01_0275 - 2136047-2136202,2137072-2137263,2137345-2137506           29   2.7  
03_05_0594 + 25981587-25981826,25981912-25982160,25982257-259838...    28   3.5  
12_02_0387 + 18453328-18453456,18453699-18453836,18454085-184541...    27   6.2  
02_04_0298 - 21733620-21733805,21733900-21734025,21734128-217342...    27   8.2  
01_05_0241 + 19815996-19816823                                         27   8.2  

>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
            3384640-3384709,3385878-3386002,3387128-3387268,
            3387362-3387519,3387644-3387803,3390136-3390213,
            3390326-3390385,3390473-3390528,3391886-3392090,
            3394107-3394192,3394296-3394406,3394536-3394607,
            3395453-3395538,3395730-3395878,3396107-3396250,
            3396335-3396442,3396997-3397027,3397609-3397713,
            3398283-3398407,3398807-3398950,3399073-3399177,
            3400748-3400799,3401549-3401696,3401936-3402130,
            3402404-3402647,3403152-3403259,3403887-3404034,
            3405467-3405525,3405876-3405945,3407008-3407333,
            3407666-3409204,3410526-3410733,3410870-3410906,
            3411024-3411072,3411143-3411271
          Length = 2025

 Score = 30.3 bits (65), Expect = 0.88
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 231  NHLFAKHNENELLHKLKAASMLC 299
            NHL +   +N+LLH+ K AS LC
Sbjct: 1119 NHLSSNGYQNDLLHRAKVASCLC 1141


>05_01_0275 - 2136047-2136202,2137072-2137263,2137345-2137506
          Length = 169

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 105 AESYLTGYVQTGYRRISVLDTSISYIIYTHI 197
           A + + GY+ +GYRR++ +  SI++I   H+
Sbjct: 70  AAASIGGYIASGYRRVAGVQLSINHIRPAHL 100


>03_05_0594 +
           25981587-25981826,25981912-25982160,25982257-25983818,
           25984139-25984390,25984471-25984581,25984669-25984729,
           25984829-25984921,25984999-25985184
          Length = 917

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 255 ENELLHKLKAASMLCHYLTCEF 320
           E  L HK    ++LC Y TCEF
Sbjct: 822 EKLLCHKQPRGTVLCRYYTCEF 843


>12_02_0387 +
           18453328-18453456,18453699-18453836,18454085-18454144,
           18461532-18462591,18463022-18463521
          Length = 628

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 138 LFGRNLLNRIQQGCHYSYFILKWPFP 61
           +FGR  LN+ +   H++Y  LK P P
Sbjct: 536 IFGRATLNKFEAISHHNYLKLKMPGP 561


>02_04_0298 -
           21733620-21733805,21733900-21734025,21734128-21734213,
           21734751-21734866,21734951-21735628,21736080-21736105
          Length = 405

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 270 HKLKAASMLCHYLTCEF*CSARYYDI 347
           HK   A +LC Y TCEF    R Y +
Sbjct: 315 HKCTKAMVLCGYYTCEFLRVIRRYRV 340


>01_05_0241 + 19815996-19816823
          Length = 275

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 138 LFGRNLLNRIQQGCHYSYFILKWPFPE 58
           + GR  L +     HY+Y +LK P P+
Sbjct: 174 IIGRTALAKFMAASHYAYQVLKMPGPK 200


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,463,795
Number of Sequences: 37544
Number of extensions: 168187
Number of successful extensions: 249
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)