Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D11f
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011059-1|AAR31130.1|  665|Drosophila melanogaster RE05438p pro...    28   6.0  
AY051429-1|AAK92853.1|  707|Drosophila melanogaster GH10492p pro...    28   7.9  
AE014298-1975|AAF48331.2|  652|Drosophila melanogaster CG32626-P...    28   7.9  
AE014298-1974|AAN09337.1|  707|Drosophila melanogaster CG32626-P...    28   7.9  
AE014298-1973|AAF48330.3|  777|Drosophila melanogaster CG32626-P...    28   7.9  
AE014298-1972|AAF48329.3|  774|Drosophila melanogaster CG32626-P...    28   7.9  

>BT011059-1|AAR31130.1|  665|Drosophila melanogaster RE05438p
           protein.
          Length = 665

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 128 RPNRLPPDIRTRY*YFIYYLYAHSDLV-KFKQERKK 232
           RP     +    Y Y+IYY+YA+  ++ KF+Q R +
Sbjct: 546 RPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSRNE 581


>AY051429-1|AAK92853.1|  707|Drosophila melanogaster GH10492p
           protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 128 RPNRLPPDIRTRY*YFIYYLYAHSDLV-KFKQER 226
           RP     +    Y Y+IYY+YA+  ++ KF+Q R
Sbjct: 482 RPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSR 515


>AE014298-1975|AAF48331.2|  652|Drosophila melanogaster CG32626-PB,
           isoform B protein.
          Length = 652

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 128 RPNRLPPDIRTRY*YFIYYLYAHSDLV-KFKQER 226
           RP     +    Y Y+IYY+YA+  ++ KF+Q R
Sbjct: 427 RPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSR 460


>AE014298-1974|AAN09337.1|  707|Drosophila melanogaster CG32626-PC,
           isoform C protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 128 RPNRLPPDIRTRY*YFIYYLYAHSDLV-KFKQER 226
           RP     +    Y Y+IYY+YA+  ++ KF+Q R
Sbjct: 482 RPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSR 515


>AE014298-1973|AAF48330.3|  777|Drosophila melanogaster CG32626-PD,
           isoform D protein.
          Length = 777

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 128 RPNRLPPDIRTRY*YFIYYLYAHSDLV-KFKQER 226
           RP     +    Y Y+IYY+YA+  ++ KF+Q R
Sbjct: 552 RPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSR 585


>AE014298-1972|AAF48329.3|  774|Drosophila melanogaster CG32626-PA,
           isoform A protein.
          Length = 774

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 128 RPNRLPPDIRTRY*YFIYYLYAHSDLV-KFKQER 226
           RP     +    Y Y+IYY+YA+  ++ KF+Q R
Sbjct: 549 RPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSR 582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,391,444
Number of Sequences: 53049
Number of extensions: 311322
Number of successful extensions: 380
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)