Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310D10f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 46 2e-05
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 43 1e-04
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 39 0.003
05_01_0103 + 686770-687017,687120-687270 38 0.005
03_06_0479 + 34217170-34217172,34217337-34217786 38 0.005
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 36 0.015
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 36 0.020
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 30 0.98
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 1.3
08_02_1170 + 24876197-24877070,24877563-24877606,24877805-248779... 29 2.3
07_03_0356 - 17142019-17142899,17145251-17145290,17145381-171455... 29 3.0
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 28 4.0
02_05_0860 - 32296743-32296769,32297328-32297357,32298432-322985... 28 4.0
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 28 5.2
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201... 27 6.9
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 27 6.9
01_06_1522 - 37962431-37963060,37963216-37963542 27 6.9
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 9.1
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 27 9.1
02_05_0073 - 25602268-25603182,25603273-25604190 27 9.1
02_01_0695 - 5202091-5202498,5204103-5204588 27 9.1
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = -2
Query: 508 KVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLR 377
KV+ KMLY+SS + KK L G+Q +QATD E S +A++++++
Sbjct: 115 KVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDRVK 158
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = -2
Query: 508 KVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 383
+V+ KMLY+SS D K+ L G+Q +QATD SE S + V+ +
Sbjct: 115 RVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSR 156
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2
Query: 508 KVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 383
+ + KMLY+SS D ++ L G+Q IQATD SE S + + +
Sbjct: 102 RTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIIRAR 143
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = -2
Query: 508 KVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAV 392
+V+ KM+Y+SS D K+ L G+Q +QATD +E + +
Sbjct: 89 RVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVI 127
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -2
Query: 505 VKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEE 386
V+ KM+Y+SS + KK L GVQ +QATD SE + + +++
Sbjct: 108 VRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKD 147
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -2
Query: 508 KVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 383
+++ KMLY++S + ++ L GV IQATD SE E + E+
Sbjct: 102 RIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRER 143
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -2
Query: 508 KVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQ 401
+++ KMLYS+S D +K+ L G IQATD +E Q
Sbjct: 102 RIRAKMLYSTSKDRIKQELDGFHYEIQATDPTETPQ 137
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2
Query: 508 KVKKKMLYSSSFDALKKSLVGVQ 440
KV+ KMLY+SS D K+ L G+Q
Sbjct: 360 KVRSKMLYASSKDRFKRELDGIQ 382
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 116 AAPPFKPKRITASRQK*AGGGGTYP 190
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>08_02_1170 +
24876197-24877070,24877563-24877606,24877805-24877900,
24877999-24878544
Length = 519
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 156 REAVMRFGLKGGAAVVTIWVAHLCCRCL*LPVTT 55
R +++ G+ G A+V++W+ + C + +PV T
Sbjct: 140 RPSLLLLGVTGTTALVSMWIHNTACTVMMMPVAT 173
>07_03_0356 -
17142019-17142899,17145251-17145290,17145381-17145512,
17145762-17145815,17145913-17145993,17146860-17146955,
17147439-17147611,17147750-17147823,17148515-17148622,
17148693-17148868,17149305-17149352,17150665-17150775,
17152172-17152226,17153434-17153534,17154176-17154290,
17155505-17155698
Length = 812
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 467 SEKVPXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 351
+E R E P R G+ +GGRRR+A +R + I
Sbjct: 5 AESCGSRGGESPPPPRTRGASAGGRRRKAEAYREVLRRI 43
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = -1
Query: 473 RRSEKVPXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDD 294
R +E V RS HPS R G + R RH S + Y R + +L D
Sbjct: 644 RAAEGVRHRSRTPHPSGRQRAHGDGRQGRSQTRHSSRCSCRYRSRRTRSPSSLTPRDQDG 703
Query: 293 T 291
T
Sbjct: 704 T 704
>02_05_0860 -
32296743-32296769,32297328-32297357,32298432-32298503,
32298967-32299812
Length = 324
Score = 28.3 bits (60), Expect = 4.0
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Frame = -2
Query: 517 TP-PKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQE---AVEEKLRATDRQ*TAF 350
TP P ++ +YS +FD + +L GV K + ++ E + A E TA
Sbjct: 2 TPLPLARQGSVYSLTFDEFQSTLGGVGKDFGSMNMDELLRSIWTAEESHAVGAATTTTAT 61
Query: 349 THELATKPNPLSDTPALTTRGHDTTSRLVLLQRKTNSI--NMIDFTGGRTSCESARVGTT 176
T +A + P + +G T R L Q+ + + +M+ F GG S A
Sbjct: 62 TASVAAAEHAAVGAPPVQRQGSLTLPR-TLSQKTVDEVWRDMMCFGGGGASTAPAAAEPP 120
Query: 175 AP 170
P
Sbjct: 121 PP 122
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -2
Query: 514 PPKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELA 335
PP +K S +F+ L VG+ K + +T S+AS +V K R R+ H L
Sbjct: 444 PPWPVRKRASSGAFEVLSSMPVGITKAVDST--SDASSASVHFK-RKKARKIVVPGHRLV 500
Query: 334 TK 329
T+
Sbjct: 501 TR 502
>07_03_1503 + 27017933-27018063,27019668-27019727,27019996-27020101,
27020254-27020325,27021008-27021061,27021707-27021856,
27022206-27022547,27022651-27024684,27024706-27024947,
27025658-27026235,27026329-27028183,27028533-27028851,
27028980-27029417
Length = 2126
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = -1
Query: 509 QGQEEDVVL*LVRRSEKVPXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDE 330
Q EED+ VR+ K+ S + P+ +P+ S GR + + +S +R
Sbjct: 846 QSDEEDIWW--VRKGTKL-HESLKAEPAQKPIKQNSRGRAKVVRKTQSLAQLASSRIEGS 902
Query: 329 TEPALRHSCPDDTRPRHH*P 270
+ H C HH P
Sbjct: 903 QGASTSHLCESKVGCSHHKP 922
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 321 GFGFVASSCVNAVYWRSVARSFSS 392
GFG V VNAV+W S+AR SS
Sbjct: 257 GFGIVFGG-VNAVFWSSLARVSSS 279
>01_06_1522 - 37962431-37963060,37963216-37963542
Length = 318
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 21 MVGRAHSPPGVKWLLEAID 77
+VG+ H PPG +WL E +D
Sbjct: 44 LVGQLHLPPGGRWLDEYMD 62
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 478 SFDALKKSLVGVQKYIQATDLSEASQEAVEEKL 380
S+DALKKS+ G+ + AT++ E E L
Sbjct: 236 SWDALKKSINGLVNKVNATNIKNIVPELFAENL 268
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 395 RRREAPRHRSPINSIYTRARDETEPALRHSCPDD 294
R R A R RSP +R + P+ RH C D
Sbjct: 358 RHRRAMRSRSPSKRRRHGSRGRSPPSSRHGCAKD 391
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 473 RRSEKVPXRSSE-VHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDE 330
RR+ + P R +E V P+ P GS GG E + P + AR++
Sbjct: 182 RRASRSPGRRAEGVSPAPAPAGSGGGGGGGERVVRQQPGKMVSVPAREK 230
>02_01_0695 - 5202091-5202498,5204103-5204588
Length = 297
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 125 PFKPKRITASRQK*AGGGGTYP 190
PF P + A++ K AGGGG P
Sbjct: 203 PFYPTKANAAQSKAAGGGGCRP 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,663,400
Number of Sequences: 37544
Number of extensions: 349596
Number of successful extensions: 1141
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -