Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310D09f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 34 0.082
SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2) 31 0.44
SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12) 31 0.44
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 31 0.44
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12) 31 0.76
SB_3700| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 30 1.3
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.3
SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_27756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_51649| Best HMM Match : PAN (HMM E-Value=0.063) 29 3.1
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 28 4.1
SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4) 28 4.1
SB_13862| Best HMM Match : Prenyltransf (HMM E-Value=4.2) 28 4.1
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 4.1
SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41) 28 4.1
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 28 5.4
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 28 5.4
SB_9837| Best HMM Match : Ribosomal_L21e (HMM E-Value=0.61) 28 5.4
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 28 5.4
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_27017| Best HMM Match : WD40 (HMM E-Value=5.8e-12) 27 7.1
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3) 27 7.1
SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2) 27 9.4
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 27 9.4
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 34.7 bits (76), Expect = 0.047
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 8/52 (15%)
Frame = +1
Query: 190 KQLHRP-----HLTASPTTATKHQPTPTV---YHKQLPTQNTVCLATKKLQP 321
K+LHRP HL +S TT T QP+ T+ YH QLP+ + + +T +QP
Sbjct: 201 KKLHRPPVPPNHLLSSSTTTTI-QPSLTIVHNYHPQLPSSHLLQASTTTIQP 251
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 33.9 bits (74), Expect = 0.082
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 318 TENAENLKVEGINEKLEEAPKSDAEVVSSQGSYYVLL 428
T +N + + ++LEEA K+DA VV SQG Y L
Sbjct: 1077 TVTVQNAEERNVTQRLEEAVKNDAIVVESQGRQYKAL 1113
>SB_47280| Best HMM Match : DUF655 (HMM E-Value=2.2)
Length = 508
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +3
Query: 201 PATSYGVPDDSYQAPANTYGLPQAA---PDTEYGVP 299
P+T YG P Y P+ YG P P T YG P
Sbjct: 333 PSTGYGHPSTRYGHPSTRYGHPSTRYGHPSTRYGHP 368
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +3
Query: 153 RPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAA---PDTEYGVP 299
+P+ + P+ + P +T YG P Y P+ YG P P T YG P
Sbjct: 311 QPSTRYGHPSTRYG-PHSTRYGHPSTGYGHPSTRYGHPSTRYGHPSTRYGHP 361
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +3
Query: 201 PATSYGVPDDSYQAPANTYGLPQAA---PDTEYGVP 299
P+T YG P Y P YG P P T YG P
Sbjct: 354 PSTRYGHPSTRYGHPLTRYGHPSTRYGHPSTRYGHP 389
>SB_40039| Best HMM Match : F5_F8_type_C (HMM E-Value=6.2e-12)
Length = 1093
Score = 31.5 bits (68), Expect = 0.44
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 207 TSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEEAPKSD 386
T+ G PDD P T G + AP T + E+ E +E + K+ E PKS
Sbjct: 898 TAEGEPDDK---PITTKGESEDAPITAT-LNDPEKAIASGGEKSVIEKDDLKVCETPKSQ 953
Query: 387 AEVVSSQGSYYVLLPGSQLQRV--QFQTEND 473
+ S+ S ++LP S + + Q Q N+
Sbjct: 954 NDSPESKASEKLVLPDSSVSDLLGQHQASNN 984
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 148 GSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKT 327
G Q + S ++ + R HL +P+T + P T PT + A + QP T
Sbjct: 255 GEPQTTISITSIISSAIPRGHLPTTPSTTPQATPPSTTSQTTAPTASQAPSAGETPQPST 314
Query: 328 RKTSK 342
T +
Sbjct: 315 ATTGE 319
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 220 SPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTRKTSKLRV*TKNSRRPRKVTP 390
+PTT T +P+PT PTQ T T T+ T T + P+ TP
Sbjct: 30 TPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTP 86
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = +1
Query: 214 TASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTRKTSKLRV*TKNSRRPRKVTPK 393
T +PTT T PTPT PT T TK T+ T + P K TPK
Sbjct: 73 TPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTP----TPTAHTPTKPTPK 128
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 214 TASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTRKT 336
T + T T+ PTPT PTQ T AT T KT
Sbjct: 43 TPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKT 83
>SB_3829| Best HMM Match : HLH (HMM E-Value=4.4e-12)
Length = 1650
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 151 SDQRSRSTCPLVKKQLHRPHLTASPTTATKHQ 246
SD+RS T KQ P T PT A KHQ
Sbjct: 940 SDRRSAPTVSAFNKQSTSPMKTTEPTVANKHQ 971
>SB_3700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +1
Query: 88 GSSDRRWNHKLLLTRPMLLPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTV 261
G RR K RP+ P + +SRS P ++ P T P K QP PT+
Sbjct: 53 GVKKRRKQRKEFRRRPLTKPQREPQSRSQYPTSMRRRFAPP-TPPPAAPIKVQPPPTL 109
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 ATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTRK-TSKLRV*TKNSRRPRKVTPK 393
+T +P + + + PT+ +K P+TRK T + R T SRR RK TP+
Sbjct: 508 STTRRPRKSTHRPKKPTRRP-----RKNSPRTRKPTRRPRKNTHKSRRTRKTTPQ 557
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/66 (31%), Positives = 25/66 (37%)
Frame = +1
Query: 130 RPMLLPGSDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNTVCLATK 309
RP LLP PL+ Q + T +PTT T P P PT T T
Sbjct: 16 RPPLLPSQQIPHHQRPPLLPSQQLPHNRTTTPTTPTTTTP-PATTTPTKPTNTTPPATTT 74
Query: 310 KLQPKT 327
+P T
Sbjct: 75 PTKPTT 80
>SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 ATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTRK-TSKLRV*TKNSRRPRKVTPK 393
+T +P + + + PT+ +K P+TRK T + R T SRR RK TP+
Sbjct: 145 STTRRPRKSTHRPKKPTRRP-----RKNSPRTRKPTRRPRKNTHKSRRTRKTTPQ 194
>SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 156 PAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTE 287
P +PT+QE P T + P Q PAN +PD +
Sbjct: 73 PHNILEVPTKQEYVPSVTHHQTPRACIQLPANEPETETRSPDID 116
>SB_27756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 150 FRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLP 266
FRP P + PP SY P SYQ P +Y P
Sbjct: 412 FRPPFKSYQPPYKSYQPPHKSYQPPHKSYQPPHKSYQPP 450
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 150 FRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEY 290
++P P + PP SY P SYQ P +Y P + Y
Sbjct: 433 YQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPPY 479
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 150 FRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEY 290
++P P + PP SY P SYQ P +Y P + Y
Sbjct: 440 YQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPPYKSYQPPY 486
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 150 FRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEY 290
++P P + PP SY P SYQ P +Y P + Y
Sbjct: 447 YQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPPYKSYQPPYKSYQPPY 493
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 150 FRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLP 266
++P P + PP SY P SYQ P +Y P
Sbjct: 426 YQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPPHKSYQPP 464
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 156 PAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLP 266
P K + P + PP SY P SYQ P +Y P
Sbjct: 422 PYKSYQ-PPHKSYQPPHKSYQPPHKSYQPPHKSYQPP 457
>SB_51649| Best HMM Match : PAN (HMM E-Value=0.063)
Length = 323
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 150 FRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDE-ETTTEN 326
+R +NL T + AT+ G+P DS ++ ++++ + E +
Sbjct: 183 WRATTNYNLDTGRLKPECATANGIPTDSCSISDRSFRDYMRGKNSDFDILSFEGGNVCKK 242
Query: 327 AENLKVEGINEKLEEAP 377
E + + GI K +EAP
Sbjct: 243 VEYINIRGIERKNQEAP 259
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 153 RPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEE-TTTENA 329
RPA+ LPTR P AT+ +D A N G+ P RD + E +
Sbjct: 131 RPARGRRLPTRPSNRPQATNGEQAEDEPAAIDNFCGINLGLPGFFKKKNRDRSGSGNEAS 190
Query: 330 ENLKVEGINEKLEEAPK 380
+N E E +PK
Sbjct: 191 DNAVEEKHKESTTPSPK 207
>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1735
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 303 DEETTTENAENLKVEGINEKLEEAPKSDAEVVSSQGSYYVLLPGSQLQRVQFQTENDV-R 479
DEE A + + + +EE+P S S++G P + + EN V R
Sbjct: 838 DEEEEQSTAMAKRAKHFDVDVEESPASSTTETSNRGK-----PAQHQDNEEDEPENKVKR 892
Query: 480 NMAYTARLQYKNED 521
N ARLQ ED
Sbjct: 893 NKGKPARLQDHEED 906
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 156 PAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQ 269
P + LPT + P Y +P + Y P N Y LP+
Sbjct: 622 PTNRYPLPTNRYPLP-TNRYPLPTNRYPIPTNRYPLPK 658
>SB_22299| Best HMM Match : Protamine_P2 (HMM E-Value=2.4)
Length = 488
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 190 KQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQP-KTRKTSKLRV*TKNS 366
KQ RP + T +K Q KQ T K +P KT KTSK + K +
Sbjct: 381 KQAARPRQASRKTETSKPQDRAK-QDKQDKQDKQESSKTSKTKPSKTSKTSKPQDQDKQA 439
Query: 367 RRPRKVTPK 393
RPR+ + K
Sbjct: 440 ARPRQASRK 448
>SB_13862| Best HMM Match : Prenyltransf (HMM E-Value=4.2)
Length = 242
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 181 LVKKQLHRPHLTA-SPTTATKHQPTPTVYHKQLPTQ-NTVCLATKKLQPKTRKTSKLRV* 354
L+ K+ R L+A + T ATK + TV PT T ATK + K + T+
Sbjct: 91 LLSKRRRRRLLSAYTSTIATKTKAKITVTTTAAPTTATTTATATKAITVKAKTTTAKTTI 150
Query: 355 TKNSRRPR 378
+R+PR
Sbjct: 151 ATTTRKPR 158
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +1
Query: 214 TASPTTATKHQPTP----TVYHKQLPTQNTVCLATKKLQPKTRKTSKLRV*TKNSRRPRK 381
T++ T+ TK+ P P T T T T + T +T+ R T + +PR
Sbjct: 1755 TSTSTSTTKYIPPPHSPPTTTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPETTKPRT 1814
Query: 382 VTPK 393
TPK
Sbjct: 1815 TTPK 1818
>SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41)
Length = 1008
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 182 SGQVERLRWSEPGRSIGRVSRSLWFHLLSLEPVVLPEAGRLSCH 51
S + +L +SE R+ ++ S ++H++ LPE LSCH
Sbjct: 767 SSILRQLEFSEQFRARAELANSWFYHIMG-GAYTLPEMDHLSCH 809
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 187 KKQLHRPHL-TASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTRK 333
++QL P +SP ++ Q ++K LP Q +AT+ +QPK ++
Sbjct: 374 QQQLFHPEPDVSSPVMTSQAQHLHPGHNKTLPMQEDPAIATQPVQPKPQE 423
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +3
Query: 213 YGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEEAPKSDAE 392
+ VPDD+Y+ P + + P E P + + + E E ++ + AE
Sbjct: 1231 FSVPDDAYEKPVSVGSTAEIVPKREQMAPVEFKIDRPYGQTTVTEVQREVIQPTVGTTAE 1290
Query: 393 VVSSQ 407
+ S+
Sbjct: 1291 ITPSR 1295
>SB_9837| Best HMM Match : Ribosomal_L21e (HMM E-Value=0.61)
Length = 185
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 217 ASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTRKTSKLR 348
A+PT ATK P + +++ T T+ T L PKT ++R
Sbjct: 5 ATPTQATKESPCKLIMGREIRT--TLPTLTDNLHPKTPNHKEVR 46
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 189 EAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLE 368
EA PA P + +A T +PD + P +E E VE + +E
Sbjct: 2 EARTPAEETEAPVEEAEALGETPIEEAESPDKKVEAPIEEAEAPEEEVEATVEEVEAPME 61
Query: 369 EAPKS--DAEV 395
EA S +AEV
Sbjct: 62 EAAASVEEAEV 72
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Frame = +3
Query: 156 PAKPFNLPTRQEAAPPATSYGVPDDSYQAPANT-YGLPQAAPDTEYGVPRDEETTTENAE 332
P +P P + PP G P +P+ T G PQ P +P +
Sbjct: 700 PPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPPPPGQLPGQQPGQAGGRP 759
Query: 333 NLKVEGINEKLEEAPKSD 386
L +G AP S+
Sbjct: 760 GLNPQGQVTTATTAPSSN 777
>SB_40532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Frame = +1
Query: 160 RSRSTCPLVKKQLHRPHLTASPTTATKHQPT--PTVYHKQLPTQNTVCLATKKLQPKTRK 333
R R + K + A P A++ T P KQ P T + + +
Sbjct: 8 RPRQASRITKTSKPQDKQAAKPRQASRKTKTSKPQDRDKQAPRHKTSKPQDTRQASRKTE 67
Query: 334 TSKLRV*TKNSRRPRKVTPK 393
TSK + K + RPR+ +PK
Sbjct: 68 TSKPQDQDKQAARPRQASPK 87
>SB_39564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/81 (22%), Positives = 30/81 (37%)
Frame = +1
Query: 151 SDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTR 330
SD ++ + H PH T + T T+H + Q P ++ Q
Sbjct: 60 SDTHTQHARSIRTLNTHTPHSTRTLNTHTQHAHLTRTLNTQTPHVHSTHTLNTYTQQHAH 119
Query: 331 KTSKLRV*TKNSRRPRKVTPK 393
T KL T+++ R T +
Sbjct: 120 STRKLHTYTQHAHLTRHSTTR 140
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 294 VPRDEETTTENAENLKVEGINEKLEEAPKSDAEVVSSQG 410
V +DE +E AE +K E I K++E PK DAE +G
Sbjct: 494 VKKDETKKSEKAE-IKKEEI--KVKEEPKDDAEKKEDEG 529
>SB_27017| Best HMM Match : WD40 (HMM E-Value=5.8e-12)
Length = 490
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 407 GLLLRPPAWISAAAGTVP 460
GL LRPP W+ +GT P
Sbjct: 218 GLYLRPPPWVWIFSGTTP 235
>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
Length = 651
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 294 HRILCRELLVVDRRCW-LVLGSCRRGRR 214
H +L + L+ + RC LV GSCRRG R
Sbjct: 535 HEVLVKVHLLFEERCAVLVGGSCRRGCR 562
>SB_51558| Best HMM Match : DSS1_SEM1 (HMM E-Value=0.2)
Length = 878
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 465 PSGTVPAAAEIQAGGRSKSPANSPLRRHFS 376
PSG+ PA +A + P++SP +R FS
Sbjct: 112 PSGSPPAVGAKKAVSKDSKPSSSPDKRLFS 141
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Frame = +1
Query: 163 SRSTCPLVKKQLHRPHLTASPTTATKHQ--PTPTVYHKQLPTQNTVCLATKKL----QPK 324
S + P + R T PTT T+ PT T + PT AT + P
Sbjct: 1408 STTAPPTTVEDKTREEATTKPTTTTRKTTIPTTTASETKPPTIRKTTTATTTVPATKPPT 1467
Query: 325 TRKTSKLRV*TKNSRRPRKVT 387
TRKT+ T R RK T
Sbjct: 1468 TRKTTTAT--TTQGRTTRKPT 1486
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 127 TRPMLLPGSDQRSRSTCPLVKKQLH--RPHLTASPTTATKHQPTPTVYHKQLPTQNTVCL 300
TR ++ D +S PL+++++ RP L K QP P K Q
Sbjct: 510 TRDVIKLEGDSKSEKRQPLMEEEVATVRPQLEEDVEKVKKEQPQPEEEFKTEQPQPEEKF 569
Query: 301 ATKKLQPK 324
T++ QPK
Sbjct: 570 KTEQPQPK 577
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 163 SRSTCPLVKKQLHRPHLTASPTTATKHQPTP--TVYHKQLPTQNTVCLATKKLQPKTRKT 336
++S+ P VKKQ + + TTA P+P ++ +PTQ +A+ +
Sbjct: 14 AKSSIPTVKKQREQSTTRNTKTTAKSGIPSPGNSIKKSPIPTQRIGSIASSVTKDYDELQ 73
Query: 337 SKLR 348
KL+
Sbjct: 74 QKLK 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,630,105
Number of Sequences: 59808
Number of extensions: 357944
Number of successful extensions: 1519
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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