Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     33   0.006
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    28   0.22 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.67 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   1.2  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   6.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.2  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 33.1 bits (72), Expect = 0.006
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = +3

Query: 165 PFNLPTRQEAAPPATSYGVPDDSYQAPANTYG--LPQAAPDTEYGVPRDEETTTENA 329
           PF+ PT   AAP  TS   P  + +A   T      Q A  TE     +E TTTE A
Sbjct: 112 PFHRPTTSTAAPEGTSVASPTTA-EASTTTEAATTTQEATTTEEATTTEEATTTEKA 167


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 27.9 bits (59), Expect = 0.22
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = +3

Query: 156 PAKPFNLPTRQEAAPPATSYGVP-DDSYQA-PANTYGLPQAAPDTEYGVPRDEETTTENA 329
           P  P +L  + +    A     P DD+ Q  P N   LP+ AP+    VP D     E+ 
Sbjct: 24  PEVPSDLQQQLDELQLADKPEAPVDDAEQPLPPNGDELPEDAPEP---VPEDGSPDEEHL 80

Query: 330 ENLKVEGINEKLEEAPKSDAE 392
           E  + E      EEA +S++E
Sbjct: 81  EEEQEEEAEADEEEADESESE 101


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 0.67
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 465  PSGTVPAAAEIQAGGRSKSPANSPLRRHFSGP 370
            P+G +    +++ GGR  +P  SP R   S P
Sbjct: 1432 PAGLISRWRDMEEGGRQSTPPASPARLARSSP 1463


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +1

Query: 106 WNHKLLLTRPMLLPGSDQRSRSTCPLVKKQLHRPHLTA 219
           WN  + + R   +    +  R  CP VK+QL   ++ A
Sbjct: 280 WNASIKIQRAECVAARRKMQRERCPEVKQQLRIVYIAA 317


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 214 TASPTTATKHQPTPTVYHKQLPTQN 288
           T +PTTAT    T    +K+L  QN
Sbjct: 303 TTTPTTATACPSTTEFNYKELNCQN 327


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 16/71 (22%), Positives = 29/71 (40%)
 Frame = -1

Query: 344 NFEVFRVFGCSFFVARHTVFCVGSCLW*TVGVGWCLVAVVGDAVRCGRWSCFLTSGQVER 165
           N +    FGC+        FC G  L  T   G+ +V+         +W+    +G    
Sbjct: 485 NLDAENKFGCT------PCFCYGHTLECTSASGYSIVSTSNFNKHKEKWTAISDTGVPVD 538

Query: 164 LRWSEPGRSIG 132
           ++++   +SIG
Sbjct: 539 VKYNSHSQSIG 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,445
Number of Sequences: 2352
Number of extensions: 11536
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)