Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS310D09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81058-3|CAB62800.1| 345|Caenorhabditis elegans Hypothetical pr... 34 0.054
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF039048-12|AAB94241.2| 296|Caenorhabditis elegans Hypothetical... 33 0.16
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 32 0.22
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 32 0.22
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL021176-2|CAA15974.2| 267|Caenorhabditis elegans Hypothetical ... 29 2.0
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 29 2.7
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 3.5
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 3.5
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 28 3.5
Z68752-8|CAA92980.2| 171|Caenorhabditis elegans Hypothetical pr... 28 4.7
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.7
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 4.7
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 4.7
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 28 4.7
Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 6.2
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 27 8.1
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81058-3|CAB62800.1| 345|Caenorhabditis elegans Hypothetical
protein F11E6.3 protein.
Length = 345
Score = 34.3 bits (75), Expect = 0.054
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 156 PAKPFNLPTRQE-AAPPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTENAE 332
PA+ P QE AP A + S + N+YG AAP E P E+ + AE
Sbjct: 50 PAETAPEPVAQEETAPEAPAQDAGYRSKRQAQNSYGDEAAAPAVEESAPAAEQPVEQAAE 109
Query: 333 NLKVEGINEKLEEAPKSDA 389
+ E E EAP DA
Sbjct: 110 PVAQE---EAAPEAPAQDA 125
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 198 PPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVP 299
PP SY P SY P TY P + P + YG P
Sbjct: 86 PPQPSYSPPKSSYGRPEPTYS-PYSRPSSSYGRP 118
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 177 PTRQEAAPPATSYGVPDDS---YQAPANTYGLP 266
P + +PP +SYG P+ + Y P+++YG P
Sbjct: 86 PPQPSYSPPKSSYGRPEPTYSPYSRPSSSYGRP 118
>AF039048-12|AAB94241.2| 296|Caenorhabditis elegans Hypothetical
protein F16B4.10 protein.
Length = 296
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = -1
Query: 437 RSRQEDVVRALRTHHFGVTFRGLLEFFVYTLNFEVFRVFGCSFFVARHTVFCVG 276
R R++++V H V F L +F+Y+ F ++G SFF++ +F +G
Sbjct: 31 RKRRKEIVLFYFRFHIDVLFG--LSYFLYSFFILGFTIYGSSFFISNSDLFWLG 82
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 189 EAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLE 368
E+AP + P +S QAP + A D+ + P+ E+ AE+++ + E +
Sbjct: 613 ESAPASVEEAAPSESTQAPVEEHKDATTAADSSHEEPK-AESDAPAAESVETAPVEEHKD 671
Query: 369 EAPKSDAEVV 398
EA + E V
Sbjct: 672 EASPTALESV 681
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 151 SDQRSRSTCPLVKKQLHRPHLTASPTTATKHQPTP 255
S Q + STCP + K+ + HL+ASP T P P
Sbjct: 121 STQSTLSTCPAITKKTTKLHLSASPQTGHAVLPYP 155
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 198 PPATSYGVPDDSYQAPANTYGL-PQ-AAPDTEYGVPR 302
PPA SY +Y AP+N Y PQ + P Y +P+
Sbjct: 68 PPANSYATAPANYAAPSNAYPFAPQYSIPMNSYAMPK 104
>Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical
protein M117.6 protein.
Length = 124
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Frame = -1
Query: 371 LLEFFVYTLNFEVFRVFGCSFFVARHTVFCVGSCLW*T-----VGVGWCLVAVVGDAVRC 207
LL FF + F VF + +F + + + +C + C + C
Sbjct: 26 LLFFFPNLMEFSVFFLAKSTFILIFNVFMKLNNCFQVFRYQRFLQYSTCCSRIRRTVPEC 85
Query: 206 GRWSCFLTSG---QVERLRWSEPGR 141
G W CFL +G +ER EPG+
Sbjct: 86 GFWRCFLPTGGSKMLERTEKDEPGK 110
>AL021176-2|CAA15974.2| 267|Caenorhabditis elegans Hypothetical
protein Y43E12A.2 protein.
Length = 267
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 172 TCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQPKTR 330
TC L K++ + + A+ + P HKQLP + V L K Q T+
Sbjct: 194 TCQLCKRKWNSQNSVANEPQSCIKCHVPVFPHKQLPVEKAVTLGLIKAQNVTK 246
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 2.7
Identities = 24/90 (26%), Positives = 35/90 (38%)
Frame = +3
Query: 195 APPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTENAENLKVEGINEKLEEA 374
A PA S+G P + APA + Q AP T A N+ G ++A
Sbjct: 290 ARPAPSFGKPRAAV-APARAPQITQRAPAATRP-STSAIRVTPIAPNVVRNGAPTTAQQA 347
Query: 375 PKSDAEVVSSQGSYYVLLPGSQLQRVQFQT 464
P+ + Q S + PG+ R+ T
Sbjct: 348 PRKPIGIARPQTSSGIAAPGAPRSRIAMPT 377
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 148 GSDQRSRSTCPL-VKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQ 318
GS+ RS P+ ++Q+ PH A + A QP P H + T T + T++ Q
Sbjct: 2525 GSNDFRRSVSPVDAQEQVDVPHSPAPSSHAESEQPVPESPHHIVETTTTTTV-TREFQ 2581
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 148 GSDQRSRSTCPL-VKKQLHRPHLTASPTTATKHQPTPTVYHKQLPTQNTVCLATKKLQ 318
GS+ RS P+ ++Q+ PH A + A QP P H + T T + T++ Q
Sbjct: 2525 GSNDFRRSVSPVDAQEQVDVPHSPAPSSHAESEQPVPESPHHIVETTTTTTV-TREFQ 2581
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 198 PPATSYGVPDDSYQAPANTY 257
PPAT+YG + Y+ P N Y
Sbjct: 72 PPATNYGTNGNEYRPPNNVY 91
>Z68752-8|CAA92980.2| 171|Caenorhabditis elegans Hypothetical
protein T12G3.6 protein.
Length = 171
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/55 (21%), Positives = 29/55 (52%)
Frame = -3
Query: 282 CRELLVVDRRCWLVLGSCRRGRRKMWPVELLLDEWAG*TASLV*TRQEHRARQQE 118
C E + + + +L+L C++ +K P E +D+W ++S + +R +++
Sbjct: 22 CHEKPLTEDQLFLLLSKCQQHTKKCMPSEEEIDQWVEVSSSKPREQSSNRGSKKD 76
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 166 RSTCPLVKKQLHRPHLTASPTTATKHQPTPTVYHKQLPT-QNTVCLATKKLQPKTRK 333
RS+ P+V + RP + S H P P+VY P+ +T +T + K K
Sbjct: 167 RSSLPIVSPDVRRPPPSLSIPLPPMHIPPPSVYFISTPSIYSTAKSSTSTVTSKLSK 223
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 27.9 bits (59), Expect = 4.7
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Frame = +3
Query: 147 GFRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTEN 326
G+ FNL Q AP G+P A +AP T G P + +
Sbjct: 5 GYGSGNSFNL---QNYAPIDPMTGIPGFGPSQNAQQQQQQASAPGTSSGGPSQAVSGASS 61
Query: 327 AENLKVEGINEKLEEAP-KSDAEVVSSQGSYYVLLP---GS--QLQRVQFQTENDVRNMA 488
++K E + ++ A K D E Q + YV P GS QR Q Q++ R M+
Sbjct: 62 GASMKTEPVARQVSTAQMKRDLE----QAAVYVPTPIPEGSTQPQQRQQQQSQPQARQMS 117
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 27.9 bits (59), Expect = 4.7
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Frame = +3
Query: 147 GFRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDEETTTEN 326
G+ FNL Q AP G+P A +AP T G P + +
Sbjct: 5 GYGSGNSFNL---QNYAPIDPMTGIPGFGPSQNAQQQQQQASAPGTSSGGPSQAVSGASS 61
Query: 327 AENLKVEGINEKLEEAP-KSDAEVVSSQGSYYVLLP---GS--QLQRVQFQTENDVRNMA 488
++K E + ++ A K D E Q + YV P GS QR Q Q++ R M+
Sbjct: 62 GASMKTEPVARQVSTAQMKRDLE----QAAVYVPTPIPEGSTQPQQRQQQQSQPQARQMS 117
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 261 LPQAAPDTEYGVPR-DEETTTENAENLKVEGINEKL 365
L AAP T G + DEET AEN ++ NE+L
Sbjct: 500 LAAAAPSTSSGASKEDEETEKLKAENAQLHEKNEEL 535
>Z66562-4|CAA91465.1| 258|Caenorhabditis elegans Hypothetical
protein F42E11.3 protein.
Length = 258
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 416 VRALRTHHFGVTFRGLLEFFVYTLNFEVFRVFGCSFFVARHT 291
+ R H+ + F YT +F V G +FF++ HT
Sbjct: 17 LNVFRKIHYLELLSQMFGFLFYTFYLIIFLVHGKTFFISEHT 58
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 207 TSYGVPDDSYQAPANTYGLPQAAPDTEYGVPRDE 308
+ YG PDD Y P YG + D +YG P+++
Sbjct: 440 SEYGRPDDRYSKP-EPYGYSR---DRDYGAPQNQ 469
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 178 PLVKKQLHRPHLTASPTTATKH-QPTPTVYHKQLPTQNTVCLATKKLQPKTRKTSKLR 348
P L P ++P+ A H PTP + TV TK L+P+ ++TSK +
Sbjct: 131 PTTTTTLETPAPESTPSMAPSHTDPTPA-------PETTVAPTTKYLRPERKQTSKAK 181
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 147 GFRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAA 275
GF P+ N+P R APP T+ ++ + + LP +A
Sbjct: 183 GFSPSSHHNIPIRHSPAPPFTTSNSSYNNIKKSTDNTILPGSA 225
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 147 GFRPAKPFNLPTRQEAAPPATSYGVPDDSYQAPANTYGLPQAA 275
GF P+ N+P R APP T+ ++ + + LP +A
Sbjct: 183 GFSPSSHHNIPIRHSPAPPFTTSNSSYNNIKKSTDNTILPGSA 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,951,785
Number of Sequences: 27780
Number of extensions: 260971
Number of successful extensions: 1184
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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