Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS310D04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70266-6|CAD57691.1|  795|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z70266-5|CAA94208.1|  798|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL023827-4|CAD57709.1|  795|Caenorhabditis elegans Hypothetical ...    27   6.2  
AL023827-3|CAA19446.1|  798|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z83731-2|CAB06023.2|  450|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AL110490-16|CAB54451.2|  922|Caenorhabditis elegans Hypothetical...    27   8.1  

>Z70266-6|CAD57691.1|  795|Caenorhabditis elegans Hypothetical
           protein C40C9.5b protein.
          Length = 795

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = -1

Query: 206 KWHHNIFTASPKVISPPVLKCFHGSISIKSAFKYIE*QNHYFAHRTIPEYCSCRANCLCI 27
           KW H       + +SP  ++     +S   AFK+   Q   F HR +P       +CL +
Sbjct: 71  KWTH--MPKDARKVSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLLPHLKKQSEDCLYM 128

Query: 26  RAVLVP 9
             + VP
Sbjct: 129 N-IYVP 133


>Z70266-5|CAA94208.1|  798|Caenorhabditis elegans Hypothetical
           protein C40C9.5a protein.
          Length = 798

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = -1

Query: 206 KWHHNIFTASPKVISPPVLKCFHGSISIKSAFKYIE*QNHYFAHRTIPEYCSCRANCLCI 27
           KW H       + +SP  ++     +S   AFK+   Q   F HR +P       +CL +
Sbjct: 71  KWTH--MPKDARKVSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLLPHLKKQSEDCLYM 128

Query: 26  RAVLVP 9
             + VP
Sbjct: 129 N-IYVP 133


>AL023827-4|CAD57709.1|  795|Caenorhabditis elegans Hypothetical
           protein C40C9.5b protein.
          Length = 795

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = -1

Query: 206 KWHHNIFTASPKVISPPVLKCFHGSISIKSAFKYIE*QNHYFAHRTIPEYCSCRANCLCI 27
           KW H       + +SP  ++     +S   AFK+   Q   F HR +P       +CL +
Sbjct: 71  KWTH--MPKDARKVSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLLPHLKKQSEDCLYM 128

Query: 26  RAVLVP 9
             + VP
Sbjct: 129 N-IYVP 133


>AL023827-3|CAA19446.1|  798|Caenorhabditis elegans Hypothetical
           protein C40C9.5a protein.
          Length = 798

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/66 (27%), Positives = 28/66 (42%)
 Frame = -1

Query: 206 KWHHNIFTASPKVISPPVLKCFHGSISIKSAFKYIE*QNHYFAHRTIPEYCSCRANCLCI 27
           KW H       + +SP  ++     +S   AFK+   Q   F HR +P       +CL +
Sbjct: 71  KWTH--MPKDARKVSPVCIQTDMPELSETKAFKHTSAQRFDFNHRLLPHLKKQSEDCLYM 128

Query: 26  RAVLVP 9
             + VP
Sbjct: 129 N-IYVP 133


>Z83731-2|CAB06023.2|  450|Caenorhabditis elegans Hypothetical
           protein M04C9.4 protein.
          Length = 450

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 95  QNHYFAHRTIPEYCSCRANC 36
           Q+HY A R    YCS R++C
Sbjct: 378 QHHYNAARDTVSYCSARSDC 397


>Z81510-4|CAB04164.1|  839|Caenorhabditis elegans Hypothetical
           protein F21D9.5 protein.
          Length = 839

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 246 SVQNIDFCTDINGEHHHTSRYNLMTRDEKKCLVV 347
           S++    CT+++G + + S   L+ RDEK C ++
Sbjct: 589 SIKVFGSCTEMHGYYRNHSILILLQRDEKVCKIL 622


>AL110490-16|CAB54451.2|  922|Caenorhabditis elegans Hypothetical
           protein Y48B6A.11 protein.
          Length = 922

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 156 WWRYYFGGRRKYIMVPFKPDVIDGTRQGVLSVQNI 260
           WW Y++GG R+  +   K +V    RQ +     I
Sbjct: 412 WWTYWYGGGRELWIPKKKKEVPKKRRQSLADASKI 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,227,542
Number of Sequences: 27780
Number of extensions: 283433
Number of successful extensions: 651
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)